RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TRIM3O75382 744 aaPredicted RBP13.59□□□□□ -0.23
LIMS4-201ENST00000413601 ERLIN1O75477 346 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 SKAP2O75563 359 aaPredicted RBP13.59□□□□□ -0.23
LIMS4-201ENST00000413601 HSPA4LO95757 839 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 IGHG3P01860 377 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 MYZAPP0CAP1 466 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 DHRS4L1P0CG22 281 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 CT45A8P0DMV1 189 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 CT45A9P0DMV2 189 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 BCKDHAP12694 445 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 NAGAP17050 411 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 NTSP30990 170 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 MC3RP41968 323 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 CASP3P42574 277 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 CORO7P57737 925 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 DCAF7P61962 342 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 PLCXD2Q0VAA5 305 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 CT45A2Q5DJT8 189 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 XKR7Q5GH72 579 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 TMEM107Q6UX40 140 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 TRILQ7L0X0 811 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 MRGPRGQ86SM5 289 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 RILPQ96NA2 401 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 AMDHD1Q96NU7 426 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 BTBD9Q96Q07 612 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 SECISBP2Q96T21 854 aaKnown RBP13.59□□□□□ -0.23
LIMS4-201ENST00000413601 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 ZNF703Q9H7S9 590 aaPredicted RBP13.59□□□□□ -0.23
LIMS4-201ENST00000413601 FOLH1BQ9HBA9 442 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 TAS2R9Q9NYW1 312 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 TMED5Q9Y3A6 229 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 ACTL7BQ9Y614 415 aa13.59□□□□□ -0.23
LIMS4-201ENST00000413601 NPIPA2E9PIF3 369 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 NPIPA3F8WFD2 350 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 ADAM10O14672 748 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 TO15178 435 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 ERN1O75460 977 aaKnown RBP13.58□□□□□ -0.24
LIMS4-201ENST00000413601 ZWINTO95229 277 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 SERPINE1P05121 402 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 RPP38P78345 283 aaKnown RBP13.58□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF385BQ569K4 471 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 TBCELQ5QJ74 424 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 TMEM198Q66K66 360 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 NPSR1Q6W5P4 371 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF551Q7Z340 670 aaPredicted RBP13.58□□□□□ -0.24
LIMS4-201ENST00000413601 NUP54Q7Z3B4 507 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 PACS2Q86VP3 889 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 SLC34A3Q8N130 599 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 HGDQ93099 445 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 TMBIM1Q969X1 311 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 CIDECQ96AQ7 238 aaPredicted RBP13.58□□□□□ -0.24
LIMS4-201ENST00000413601 PPCDCQ96CD2 204 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF597Q96LX8 424 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 PPP3R2Q96LZ3 170 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 VSTM2LQ96N03 204 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 NODALQ96S42 347 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 STMN4Q9H169 189 aaPredicted RBP13.58□□□□□ -0.24
LIMS4-201ENST00000413601 REEP4Q9H6H4 257 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 LDAHQ9H6V9 325 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 METTL7AQ9H8H3 244 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 SH3BP4Q9P0V3 963 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 TNFRSF10DQ9UBN6 386 aa13.58□□□□□ -0.24
LIMS4-201ENST00000413601 NUP214P35658 2090 aaPredicted RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 A0A087WV62 115 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 A0A1B0GVC2 190 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 E9PLN8 166 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 PLOD2O00469 737 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 PDPK1O15530 556 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 SUSD5O60279 629 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 UGT2B11O75310 529 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 REM1O75628 298 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 SLITRK5O94991 958 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 SNX4O95219 450 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 GDF1P27539 372 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 MASP1P48740 699 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 MAN2A2P49641 1150 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 ABCE1P61221 599 aaKnown RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 HSPB3Q12988 150 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 ATP6AP1LQ52LC2 224 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 EMC4Q5J8M3 183 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 C6orf136Q5SQH8 315 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 BEND6Q5SZJ8 279 aaPredicted RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 FNDC7Q5VTL7 733 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 SLC44A2Q8IWA5 706 aaPredicted RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 LIX1Q8N485 282 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF808Q8N4W9 903 aaPredicted RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 ZNF781Q8N8C0 355 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 OR4N2Q8NGD1 307 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 OR5M9Q8NGP3 310 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 ELP4Q96EB1 424 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 PAIP2Q9BPZ3 127 aaKnown RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 VKORC1Q9BQB6 163 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 C1orf50Q9BV19 199 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 C20orf27Q9GZN8 174 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 EXO5Q9H790 373 aa13.57□□□□□ -0.24
LIMS4-201ENST00000413601 C19orf53Q9UNZ5 99 aaPredicted RBP13.57□□□□□ -0.24
LIMS4-201ENST00000413601 PCNX3Q9H6A9 2034 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms