RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CNOT3O75175 753 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 PDE9AO76083 593 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PGM3O95394 542 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 H6PDO95479 791 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 DLGAP3O95886 979 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ALBP02768 609 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 MT-ND1P03886 318 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 HEXBP07686 556 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CHRM4P08173 479 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CYC1P08574 325 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ALOX5P09917 674 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 JMJD7P0C870 316 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 NR2F1P10589 423 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 FCGR1AP12314 374 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 HOXB6P17509 224 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 AGXTP21549 392 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PEX2P28328 305 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 MAP3K8P41279 467 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 MAGEA2P43356 314 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PTDSS1P48651 473 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 EMDP50402 254 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PGDP52209 483 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 FOXL2P58012 376 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 HPCAP84074 193 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CHRNB3Q05901 458 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CAMK2BQ13554 666 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 GNA13Q14344 377 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ZNF267Q14586 743 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 TRIP10Q15642 601 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 NSDHLQ15738 373 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ATP6AP1Q15904 470 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CYBRD1Q53TN4 286 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 DCAF12Q5T6F0 453 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ATAD3BQ5T9A4 648 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PRAMEF8Q5VWM4 474 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PRAMEF7Q5VXH5 474 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 HEPHL1Q6MZM0 1159 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 HMBOX1Q6NT76 420 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ZNF517Q6ZMY9 492 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 LANCL3Q6ZV70 420 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ASCL5Q7RTU5 278 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 C16orf62Q7Z3J2 963 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 VTCN1Q7Z7D3 282 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 SLCO6A1Q86UG4 719 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 LAPTM4BQ86VI4 370 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 TMEM151BQ8IW70 566 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ZNF615Q8N8J6 731 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 TMEM102Q8N9M5 508 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 PLPP5Q8NEB5 264 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 OR7G1Q8NGA0 311 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 OR10Q1Q8NGQ4 319 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 OR14A16Q8NHC5 309 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 BBS10Q8TAM1 723 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 SLC2A12Q8TD20 617 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ADAMTS15Q8TE58 950 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 LRTOMTQ8WZ04 291 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 SLC9A6Q92581 669 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 CDS1Q92903 461 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 RNF166Q96A37 237 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 SLC35A4Q96G79 324 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PYURFQ96I23 114 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 FBXL20Q96IG2 436 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 VSTM2LQ96N03 204 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 TRNT1Q96Q11 434 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 PHOX2BQ99453 314 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 STACQ99469 402 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ZPBPQ9BS86 351 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 LMF2Q9BU23 707 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 CHID1Q9BWS9 393 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 BTBD2Q9BX70 525 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PIGUQ9H490 435 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 SOX17Q9H6I2 414 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 WDR54Q9H977 334 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 FOLH1BQ9HBA9 442 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 BCL2L10Q9HD36 194 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 DUSP22Q9NRW4 184 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PNO1Q9NRX1 252 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 AGPAT4Q9NRZ5 378 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 EXD2Q9NVH0 621 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 ADPRHL2Q9NX46 363 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 GIN1Q9NXP7 522 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 NXT1Q9UKK6 140 aaKnown RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 PRDM4Q9UKN5 801 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 SATB2Q9UPW6 733 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 LIPT1Q9Y234 373 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 DTX4Q9Y2E6 619 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 PCDHGA8Q9Y5G5 932 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 HEMK1Q9Y5R4 338 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 B3GALT1Q9Y5Z6 326 aa6.19□□□□□ -1.42
VPS41-204ENST00000413141 GPC6Q9Y625 555 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 NUP214P35658 2090 aaPredicted RBP6.19□□□□□ -1.42
VPS41-204ENST00000413141 A0A0G2JPF8 293 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 TEX51A0A1B0GUA7 166 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 FAM149AA5PLN7 773 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 A8MUA0 341 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 HNRNPCL2B2RXH8 293 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 HNRNPCL3B7ZW38 293 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 C9orf172C9J069 976 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 C9J4A7 227 aa6.18□□□□□ -1.42
VPS41-204ENST00000413141 M0QX08 132 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms