RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 CRYGBP07316 175 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 IVLP07476 585 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 LYNP07948 512 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CDH1P12830 882 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 HOXB2P14652 356 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 POU2F1P14859 743 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 FDFT1P37268 417 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 EPS15P42566 896 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CASP4P49662 377 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 FHITP49789 147 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 DCDC1P59894 354 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 ENPEPQ07075 957 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 SRSF4Q08170 494 aaKnown RBP4.33□□□□□ -1.72
LSM5-205ENST00000409952 TRAF2Q12933 501 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 SRSF9Q13242 221 aaKnown RBP eCLIP4.33□□□□□ -1.72
LSM5-205ENST00000409952 TFDP1Q14186 410 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 NFATC4Q14934 902 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 DUSP5Q16690 384 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 GGTA1PQ4G0N0 100 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 XKR6Q5GH73 641 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 C6orf226Q5I0X4 101 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 STEAP1BQ6NZ63 245 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 LEG1Q6P5S2 330 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CCDC80Q76M96 950 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 Q7L0L9 218 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 PYROXD2Q8N2H3 581 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CENPSQ8N2Z9 138 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CLDN19Q8N6F1 224 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 TCEANCQ8N8B7 351 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 CEP112Q8N8E3 955 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 BBS1Q8NFJ9 593 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 OR4D5Q8NGN0 318 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 C16orf52Q8NHV5 167 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 MRPL24Q96A35 216 aaKnown RBP4.33□□□□□ -1.72
LSM5-205ENST00000409952 RTP4Q96DX8 246 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 C7orf34Q96L11 122 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 ZNF385AQ96PM9 386 aaKnown RBP4.33□□□□□ -1.72
LSM5-205ENST00000409952 PANX1Q96RD7 426 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 LPAR4Q99677 370 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 STRADBQ9C0K7 418 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 DNTTIP1Q9H147 329 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 TDRD3Q9H7E2 651 aaKnown RBP4.33□□□□□ -1.72
LSM5-205ENST00000409952 ZBTB20Q9HC78 741 aaPredicted RBP4.33□□□□□ -1.72
LSM5-205ENST00000409952 GHRLQ9UBU3 117 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 WNT16Q9UBV4 365 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 PEF1Q9UBV8 284 aaKnown RBP4.33□□□□□ -1.72
LSM5-205ENST00000409952 STK38LQ9Y2H1 464 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 NPTNQ9Y639 398 aa4.33□□□□□ -1.72
LSM5-205ENST00000409952 TRBV4-1A0A0J9YWV2 114 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 A0A1B0GVL5 298 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 IMPA2O14732 288 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 EPHB6O15197 1021 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 DFFBO76075 338 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 CALCAP01258 141 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 UMODP07911 640 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ERVK-10P10266 1014 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 CDK4P11802 303 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 FGF5P12034 268 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ANXA3P12429 323 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 NCK1P16333 377 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 CYP2B6P20813 491 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 TBXA2RP21731 343 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 CD1BP29016 333 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 SSR1P43307 286 aaKnown RBP4.32□□□□□ -1.72
LSM5-205ENST00000409952 TPMTP51580 245 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 FUT6P51993 359 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 BACE1P56817 501 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 BNIP1Q12981 228 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 GAGE5Q13069 117 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 GAGE6Q13070 117 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ENPP2Q13822 863 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 RBMS2Q15434 407 aaKnown RBP4.32□□□□□ -1.72
LSM5-205ENST00000409952 TRIP6Q15654 476 aaKnown RBP4.32□□□□□ -1.72
LSM5-205ENST00000409952 HLFQ16534 295 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 HAGHQ16775 308 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ZNF260Q3ZCT1 412 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 NKAIN1Q4KMZ8 207 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 PDSS1Q5T2R2 415 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 DCAF12Q5T6F0 453 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 OR4F3Q6IEY1 312 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 KIAA1161Q6NSJ0 714 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 KCNIP4Q6PIL6 250 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 SHC4Q6S5L8 630 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 GCNT7Q6ZNI0 430 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 EIF3MQ7L2H7 374 aaKnown RBP4.32□□□□□ -1.72
LSM5-205ENST00000409952 GPR142Q7Z601 462 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ANKRD37Q7Z713 158 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 LUZP2Q86TE4 346 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 TMEM17Q86X19 198 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 SFR1Q86XK3 245 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 RELL2Q8NC24 303 aaPredicted RBP4.32□□□□□ -1.72
LSM5-205ENST00000409952 STXBP6Q8NFX7 210 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 OR4C5Q8NGB2 326 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 OR1L4Q8NGR5 311 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 SCFD1Q8WVM8 642 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 ST8SIA1Q92185 356 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 PELI1Q96FA3 418 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 TSNARE1Q96NA8 513 aa4.32□□□□□ -1.72
LSM5-205ENST00000409952 GAL3ST1Q99999 423 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms