RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 VNN3Q9NY84 501 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SERTAD3Q9UJW9 196 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CDC14AQ9UNH5 594 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 SRPK3Q9UPE1 567 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 CLCA2Q9UQC9 943 aa5.16□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF318Q5VUA4 2279 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 BDP1A6H8Y1 2624 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 A0A1B0GX78 115 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM247A6NEH6 219 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 D6RAR5 112 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 EI24O14681 340 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 FLRT2O43155 660 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 SLC28A2O43868 658 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 GUSBP08236 651 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 ACP2P11117 423 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 RORAP35398 523 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 DCTP40126 519 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 GRK6P43250 576 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 XCR1P46094 333 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 KCNJ5P48544 419 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 PRKAG1P54619 331 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 RAB15P59190 212 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 PPP2R2BQ00005 443 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TRA2AQ13595 282 aaKnown RBP eCLIP5.15□□□□□ -1.58
EPHA4-202ENST00000409854 ARHGAP11BQ3KRB8 267 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 LAIR1Q6GTX8 287 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TCEAL6Q6IPX3 200 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 RHBDD2Q6NTF9 364 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 SHQ1Q6PI26 577 aaKnown RBP5.15□□□□□ -1.58
EPHA4-202ENST00000409854 QSOX2Q6ZRP7 698 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TTLL10Q6ZVT0 673 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 SZRD1Q7Z422 152 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TMEM179BQ7Z7N9 219 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF605Q86T29 641 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 GPR135Q8IZ08 494 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 GALNT4Q8N4A0 578 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 C7orf57Q8NEG2 295 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TCEAL3Q969E4 200 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 NRBF2Q96F24 287 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 SLC35A4Q96G79 324 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TPD52L3Q96J77 140 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 MAGED4Q96JG8 741 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF578Q96N58 590 aaPredicted RBP5.15□□□□□ -1.58
EPHA4-202ENST00000409854 NR1H4Q96RI1 486 aaPredicted RBP5.15□□□□□ -1.58
EPHA4-202ENST00000409854 ZNF607Q96SK3 696 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 PELOQ9BRX2 385 aaKnown RBP5.15□□□□□ -1.58
EPHA4-202ENST00000409854 NDC1Q9BTX1 674 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 OSBPL11Q9BXB4 747 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 SLC38A1Q9H2H9 487 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 PIGUQ9H490 435 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 CXorf21Q9HAI6 301 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 DUSP22Q9NRW4 184 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 CALML5Q9NZT1 146 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 TRPC4Q9UBN4 977 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 AP4B1Q9Y6B7 739 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 KCNE3Q9Y6H6 103 aa5.15□□□□□ -1.58
EPHA4-202ENST00000409854 LNP1A1A4G5 178 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 hCG_2039718K7EN88 272 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 CLDN4O14493 209 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 DNAJB5O75953 348 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 SOX30O94993 753 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ZIC2O95409 532 aaPredicted RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ALPLP05186 524 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ZNF23P17027 643 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 NT5EP21589 574 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ALDH3A2P51648 485 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 DAB2P98082 770 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ZFP36L1Q07352 338 aaKnown RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 SLC13A2Q13183 592 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 DAG1Q14118 895 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 SERTAD2Q14140 314 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 GK3PQ14409 553 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 BCL2A1Q16548 175 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 NRF1Q16656 503 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 DUSP7Q16829 419 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 NANOGNBQ7Z5D8 188 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 CHERPQ8IWX8 916 aaKnown RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 VWA5B2Q8N398 1253 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 METTL27Q8N6F8 245 aaPredicted RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 CDRT4Q8N9R6 151 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 SLC16A11Q8NCK7 471 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 XAGE5Q8WWM1 108 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 COL26A1Q96A83 441 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 RDH12Q96NR8 316 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ZNF300Q96RE9 604 aaPredicted RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 EPYCQ99645 322 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 YIPF4Q9BSR8 244 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 LMF2Q9BU23 707 aaKnown RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 RBCK1Q9BYM8 510 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 SLC7A5P2Q9GIP4 190 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 NDUFAF4Q9P032 175 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 IFT80Q9P2H3 777 aaPredicted RBP5.15□□□□□ -1.59
EPHA4-202ENST00000409854 BAG5Q9UL15 447 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 RAB23Q9ULC3 237 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 AK5Q9Y6K8 562 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 SDK1Q7Z5N4 2213 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 ZDBF2Q9HCK1 2354 aa5.15□□□□□ -1.59
EPHA4-202ENST00000409854 NINQ8N4C6 2090 aa5.14□□□□□ -1.59
EPHA4-202ENST00000409854 IGLV3-12A0A075B6K2 115 aa5.14□□□□□ -1.59
EPHA4-202ENST00000409854 G3V2T6 193 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms