RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 SEMA6AQ9H2E6 1030 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 KCNK15Q9H427 330 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 NT5MQ9NPB1 228 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 ELOVL2Q9NXB9 296 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 ZNF624Q9P2J8 865 aaPredicted RBP3.91□□□□□ -1.78
CLK1-203ENST00000409769 DEC1Q9P2X7 70 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 THAP10Q9P2Z0 257 aaPredicted RBP3.91□□□□□ -1.78
CLK1-203ENST00000409769 ANAPC5Q9UJX4 755 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 HPCAL4Q9UM19 191 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 PLAGL1Q9UM63 463 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 DUSP12Q9UNI6 340 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 GPR34Q9UPC5 381 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 WBP11Q9Y2W2 641 aaKnown RBP3.91□□□□□ -1.78
CLK1-203ENST00000409769 PCDHGA5Q9Y5G8 931 aa3.91□□□□□ -1.78
CLK1-203ENST00000409769 TECTAO75443 2155 aa3.9□□□□□ -1.78
CLK1-203ENST00000409769 TRPM6Q9BX84 2022 aa3.9□□□□□ -1.78
CLK1-203ENST00000409769 A0A1W2PQ09 198 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TSPAN11A1L157 253 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PMS2P5A8MQ11 134 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 K7EQS6 105 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TO15178 435 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PSMD3O43242 534 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 AVILO75366 819 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 BANF1O75531 89 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 CREG1O75629 220 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 IGSF6O95976 241 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 AGTP01019 485 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 C1QAP02745 245 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 AMBPP02760 352 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 APODP05090 189 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 ATP5BP06576 529 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 CTSLP07711 333 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 SERPINF2P08697 491 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 IGHV4-38-2P0DP08 117 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 GLULP15104 373 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 POLR2EP19388 210 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 CD86P42081 329 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 RHOAP61586 193 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 AP1S1P61966 158 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 SNRPEP62304 92 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 SNRPD1P62314 119 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 KDSRQ06136 332 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PRKG2Q13237 762 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PRPSAP1Q14558 356 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 NR1D2Q14995 579 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 FASTKD3Q14CZ7 662 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 PCLAFQ15004 111 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 UAP1Q16222 522 aaPredicted RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 CARD16Q5EG05 197 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 SPDYCQ5MJ68 293 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 ARMC3Q5W041 872 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 DHRS7BQ6IAN0 325 aaPredicted RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 KLC3Q6P597 504 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PPP1R21Q6ZMI0 780 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 LINC00523Q86TU6 105 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 POC5Q8NA72 575 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 ZNF485Q8NCK3 441 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 IPMKQ8NFU5 416 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 OR10V1Q8NGI7 309 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 OR52K1Q8NGK4 314 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 OR2A12Q8NGT7 310 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PIH1D2Q8WWB5 315 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 IFT81Q8WYA0 676 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 ECHDC3Q96DC8 303 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 LRRC39Q96DD0 335 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 LGALS12Q96DT0 336 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 MSANTD3Q96H12 275 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 GDAP1L1Q96MZ0 367 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 P2RY13Q9BPV8 354 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TBL1YQ9BQ87 522 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TDRD1Q9BXT4 1180 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 MRPL1Q9BYD6 325 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 BARHL1Q9BZE3 327 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TM6SF2Q9BZW4 377 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TSPYL1Q9H0U9 437 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TMEM245Q9H330 911 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 CDC42EP4Q9H3Q1 356 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 SLA2Q9H6Q3 261 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 C8orf33Q9H7E9 229 aaPredicted RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 LRRC40Q9H9A6 602 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 MRM3Q9HC36 420 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 HHATLQ9HCP6 504 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 XAB2Q9HCS7 855 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 MBNL1Q9NR56 388 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 HEBP1Q9NRV9 189 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 ZNF446Q9NWS9 450 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 C2orf42Q9NWW7 574 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 NINJ2Q9NZG7 142 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 THEGQ9P2T0 379 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 MTRF1LQ9UGC7 380 aaKnown RBP3.9□□□□□ -1.79
CLK1-203ENST00000409769 TTLL3Q9Y4R7 772 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 TEX264Q9Y6I9 313 aa3.9□□□□□ -1.79
CLK1-203ENST00000409769 PLXND1Q9Y4D7 1925 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 EML5Q05BV3 1969 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 EDDM13A0A1B0GTR0 161 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 MED19A0JLT2 244 aaPredicted RBP3.89□□□□□ -1.79
CLK1-203ENST00000409769 SDR42E2A6NKP2 422 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 SMIM1B2RUZ4 78 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 BLOC1S5-TXNDC5H3BN57 136 aa3.89□□□□□ -1.79
CLK1-203ENST00000409769 GOLGA8MH3BSY2 632 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms