RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 FOXL2P58012 376 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 RNF4P78317 190 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 RBBP4Q09028 425 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 COL9A2Q14055 689 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 CYP27C1Q4G0S4 372 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 IRAK1BP1Q5VVH5 260 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 C6orf120Q7Z4R8 191 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 NET1Q7Z628 596 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 SERPINA11Q86U17 422 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 MSRB3Q8IXL7 192 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 C9orf40Q8IXQ3 194 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 ADIPOR1Q96A54 375 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 CNTNAP3BQ96NU0 1288 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 NPAS2Q99743 824 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 NUDT9Q9BW91 350 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 CNTNAP3Q9BZ76 1288 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 PIGUQ9H490 435 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 TMEM38AQ9H6F2 299 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 FOLH1BQ9HBA9 442 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF160Q9HCG1 818 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 Q9N2J8 555 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 POLE3Q9NRF9 147 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 BCAP29Q9UHQ4 241 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 ZNF223Q9UK11 482 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 PRPF19Q9UMS4 504 aaKnown RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 LIPT1Q9Y234 373 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 GPR55Q9Y2T6 319 aaPredicted RBP12.09□□□□□ -0.47
LIMS2-203ENST00000409254 USP24Q9UPU5 2620 aa12.09□□□□□ -0.47
LIMS2-203ENST00000409254 TLN1Q9Y490 2541 aaKnown RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 TRBV11-1A0A0K0K1C0 115 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 C2orf92A0A1B0GVN3 265 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 ABCB7O75027 752 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 ITGB2P05107 769 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 WT1P19544 449 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 EFNA1P20827 205 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 SLC6A2P23975 617 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 TRHRP34981 398 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 CPOXP36551 454 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 MVDP53602 400 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 PSMD4P55036 377 aaKnown RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 NRG3P56975 720 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 ZNF155Q12901 538 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 DUSP8Q13202 625 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 RGNQ15493 299 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 HLA-DQA1Q5Y7H0 255 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 NANOGP8Q6NSW7 305 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 CCDC121Q6ZUS5 278 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 GPALPP1Q8IXQ4 340 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 TAGAPQ8N103 731 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 CHDHQ8NE62 594 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 LCORQ96JN0 433 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 DEFB126Q9BYW3 111 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 RNF32Q9H0A6 362 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 MMADHCQ9H3L0 296 aaPredicted RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 KAT8Q9H7Z6 458 aaKnown RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 NANOGQ9H9S0 305 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 HHATLQ9HCP6 504 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 EXD2Q9NVH0 621 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 CALML5Q9NZT1 146 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 MRTO4Q9UKD2 239 aaKnown RBP12.08□□□□□ -0.48
LIMS2-203ENST00000409254 PCDHGB7Q9Y5F8 929 aa12.08□□□□□ -0.48
LIMS2-203ENST00000409254 ITPR1Q14643 2758 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 IGHV3-20A0A0C4DH32 117 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 TMEM247A6NEH6 219 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 A8MUA0 341 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 C1QTNF9BB2RNN3 333 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 HRKO00198 91 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 CEACAM4O75871 244 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 ALOX5P09917 674 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 C1QTNF9P0C862 333 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 ATXN8OSP0DMR3 200 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 CD1EP15812 388 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 MATN1P21941 496 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 EEFSECP57772 596 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 MRPS22P82650 360 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 PSG6Q00889 435 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 LASP1Q14847 261 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 EXOSC7Q15024 291 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 LACTB2Q53H82 288 aaPredicted RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 CRB2Q5IJ48 1285 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 ATAD3BQ5T9A4 648 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 HEPHL1Q6MZM0 1159 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 ERICH5Q6P6B1 374 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 SZRD1Q7Z422 152 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 HPS6Q86YV9 775 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 RBM15BQ8NDT2 890 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 TNIP2Q8NFZ5 429 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 OR5AK3PQ8NH89 298 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 SLC22A8Q8TCC7 542 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 ADAMTS15Q8TE58 950 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 APOBEC4Q8WW27 367 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 NAF1Q96HR8 494 aaKnown RBP12.07□□□□□ -0.48
LIMS2-203ENST00000409254 ZNF354BQ96LW1 612 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 G6PC3Q9BUM1 346 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 A4GALTQ9NPC4 353 aa12.07□□□□□ -0.48
LIMS2-203ENST00000409254 SLAMF8Q9P0V8 285 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms