RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 SEMA7AO75326 666 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 UGT2B17O75795 530 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 OXSR1O95747 527 aaPredicted RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 ANGPTL1O95841 491 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ALOX5P09917 674 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CCDC159P0C7I6 412 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ACP2P11117 423 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 FUT4P22083 530 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CBLP22681 906 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 AVPR1BP47901 424 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ARRB1P49407 418 aaPredicted RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 PDX1P52945 283 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 DUSP5Q16690 384 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ARHGAP11BQ3KRB8 267 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 MLIPQ5VWP3 458 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ZCCHC12Q6PEW1 402 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 KCTD8Q6ZWB6 473 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 GPR141Q7Z602 305 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 SLC35F3Q8IY50 421 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 AQP11Q8NBQ7 271 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 DOK4Q8TEW6 326 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ZNF566Q969W8 418 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ELF4Q99607 663 aaPredicted RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 PIGUQ9H490 435 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CACYBPQ9HB71 228 aaKnown RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 FAAHO00519 579 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 DUX1O43812 170 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 OR10H2O60403 315 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 EPPINO95925 133 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 GLB1P16278 677 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 ELAVL4P26378 380 aaKnown RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 MGAT2Q10469 447 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 SLC13A2Q13183 592 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CWF19L1Q69YN2 538 aaKnown RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 ZNF595Q8IYB9 648 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CARFQ8N187 725 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CDRT4Q8N9R6 151 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 BPIFB6Q8NFQ5 453 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 PEX11GQ96HA9 241 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 FNDC11Q9BVV2 318 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 RBCK1Q9BYM8 510 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 MTHFD2LQ9H903 347 aaPredicted RBP17.72■□□□□ 0.43
USP39-202ENST00000409025 VCX3AQ9NNX9 186 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 A4GNTQ9UNA3 340 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 CEPT1Q9Y6K0 416 aa17.72■□□□□ 0.43
USP39-202ENST00000409025 H3BSA7 217 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 FCMRO60667 390 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 ABCB7O75027 752 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 PAX7P23759 505 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 GPR3P46089 330 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 ZXDAP98168 799 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 MAD2L1BPQ15013 274 aaPredicted RBP17.71■□□□□ 0.43
USP39-202ENST00000409025 INAVAQ3KP66 663 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 ZBED5Q49AG3 693 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 ZNF770Q6IQ21 691 aaPredicted RBP17.71■□□□□ 0.43
USP39-202ENST00000409025 FRRS1Q6ZNA5 592 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 WDR5BQ86VZ2 330 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 VRK2Q86Y07 508 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 PLXDC1Q8IUK5 500 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 PARP8Q8N3A8 854 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 OR6T1Q8NGN1 323 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 OR52P1PQ8NH57 321 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 GTPBP3Q969Y2 492 aaKnown RBP17.71■□□□□ 0.43
USP39-202ENST00000409025 CTHRC1Q96CG8 243 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 POLR1BQ9H9Y6 1135 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 WDR45Q9Y484 360 aa17.71■□□□□ 0.43
USP39-202ENST00000409025 FITM1A5D6W6 292 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 CTNSO60931 367 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 GASTP01350 101 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 CT62P0C5K7 136 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 POU2F1P14859 743 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 PRKAR1BP31321 381 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 GGT2P36268 569 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 ARL4DP49703 201 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 CXCR4P61073 352 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 STX4Q12846 297 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 PIN1Q13526 163 aaPredicted RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 GRM7Q14831 915 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 AMZ1Q400G9 498 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 EXOSC6Q5RKV6 272 aaKnown RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 DHRS4L2Q6PKH6 230 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 ZG16BQ96DA0 208 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 MMABQ96EY8 250 aaPredicted RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 PRRC1Q96M27 445 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 STACQ99469 402 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 SPRTNQ9H040 489 aaPredicted RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 DUSP22Q9NRW4 184 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 KLHL28Q9NXS3 571 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 MKLN1Q9UL63 735 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 IFT52Q9Y366 437 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 PCDHGA6Q9Y5G7 932 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 CLDN4O14493 209 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 ZIC2O95409 532 aaPredicted RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 ADAP00813 363 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 PDGFBP01127 241 aaPredicted RBP17.7■□□□□ 0.42
USP39-202ENST00000409025 GIMD1P0DJR0 217 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 GSTT1P30711 240 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 EMP3P54852 163 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 GPLD1P80108 840 aa17.7■□□□□ 0.42
USP39-202ENST00000409025 MAT1AQ00266 395 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms