RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MARVELD2Q8N4S9 558 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ZFP28Q8NHY6 868 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 CDC26Q8NHZ8 85 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 UCN3Q969E3 161 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 EXOSC8Q96B26 276 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC35A4Q96G79 324 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 APIPQ96GX9 242 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF764Q96H86 408 aaPredicted RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 APOPT1Q96IL0 206 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNF681Q96N22 645 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TRIM8Q9BZR9 551 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ROPN1BQ9BZX4 212 aaPredicted RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC6A15Q9H2J7 730 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ROPN1Q9HAT0 212 aaPredicted RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 C3orf14Q9HBI5 128 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 EML4Q9HC35 981 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 DDX18Q9NVP1 670 aaKnown RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 ALKBH4Q9NXW9 302 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TAS2R7Q9NYW3 318 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 HEY2Q9UBP5 337 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 KCNN3Q9UGI6 736 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 FOXD3Q9UJU5 478 aaPredicted RBP8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 EMCNQ9ULC0 261 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TMED5Q9Y3A6 229 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 OR10H1Q9Y4A9 318 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 TIMM22Q9Y584 194 aa8.32□□□□□ -1.08
SNORD88A-201ENST00000408314 NBPF19A0A087WUL8 3843 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 NPIPB8E9PQR5 432 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 AZIN1O14977 448 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 ZNHIT1O43257 154 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 REM1O75628 298 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 CBR3O75828 277 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 LRATO95237 230 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 IL2RAP01589 272 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 NUDT17P0C025 328 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 RFPL3SP0C7P2 107 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 GLI4P10075 376 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 PRPH2P23942 346 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 MSX1P28360 303 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 MAPK1P28482 360 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 SERPINB5P36952 375 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 RPL3P39023 403 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 ASMTP46597 345 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EMDP50402 254 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 NCBP2P52298 156 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 PNLIPRP2P54317 469 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EEF1A1P68104 462 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 RAE1P78406 368 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 MRPS35P82673 323 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 SLC18A2Q05940 514 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 CRYZQ08257 329 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 NNATQ16517 81 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 TRMT12Q53H54 448 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EEF1A1P5Q5VTE0 462 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 CES4AQ5XG92 561 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 AAGABQ6PD74 315 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 TMEM64Q6YI46 380 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 NCCRP1Q6ZVX7 275 aaPredicted RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 LARP4Q71RC2 724 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 CCDC116Q8IYX3 515 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 PRR22Q8IZ63 422 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 ACBD4Q8NC06 268 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 OR9A2Q8NGT5 310 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EPS8L3Q8TE67 593 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 HGDQ93099 445 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 C11orf24Q96F05 449 aaPredicted RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 LURAP1Q96LR2 239 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 KCNA7Q96RP8 456 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 CCT7Q99832 543 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 TREX2Q9BQ50 279 aaPredicted RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EBPLQ9BY08 206 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 PRDM14Q9GZV8 571 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 UBQLN3Q9H347 655 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 PROK2Q9HC23 129 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 MCCC2Q9HCC0 563 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 C1orf109Q9NX04 203 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EXO1Q9UQ84 846 aaKnown RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 DTX4Q9Y2E6 619 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 GPR55Q9Y2T6 319 aaPredicted RBP8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
SNORD88A-201ENST00000408314 EXPH5Q8NEV8 1989 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 LRBAP50851 2863 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 TLDC2A0PJX2 215 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 MYO1GB0I1T2 1018 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 TMEM114B3SHH9 223 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 C19orf84I3L1E1 186 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 PLOD2O00469 737 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 GNB5O14775 395 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 NPHS1O60500 1241 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 UGT2B11O75310 529 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 SEC22BO75396 215 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 TOXO94900 526 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 EPPINO95925 133 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 SHBGP04278 402 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 PRF1P14222 555 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 CHN1P15882 459 aa8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 ENDOUP21128 410 aaKnown RBP8.3□□□□□ -1.08
SNORD88A-201ENST00000408314 PTPN6P29350 595 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms