RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 MMP21Q8N119 569 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 AMER2Q8N7J2 671 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 TCEANCQ8N8B7 351 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 OR2I1PQ8NGU4 316 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 MOSPD2Q8NHP6 518 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 IFI44Q8TCB0 444 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 VWCEQ96DN2 955 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 FEVQ99581 238 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 NT5DC2Q9H857 520 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 A6NCN8 305 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 AGAP14A8MT82 685 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 SOX1O00570 391 aaPredicted RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 PLD2O14939 933 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 RENP00797 406 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 ETS2P15036 469 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 ZNF823P16415 610 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 ZNF24P17028 368 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 SELENOWP63302 87 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 HOXC5Q00444 222 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 GINS1Q14691 196 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 DGUOKQ16854 277 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 DCAF12Q5T6F0 453 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 GARNL3Q5VVW2 1013 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 SLC48A1Q6P1K1 146 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 UBE2Q1Q7Z7E8 422 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 PDSS2Q86YH6 399 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 OR4K5Q8NGD3 323 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 ASB15Q8WXK1 588 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 NR4A3Q92570 626 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 HSPBAP1Q96EW2 488 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 OR7D2Q96RA2 312 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 TMEM121BQ9BXQ6 578 aaPredicted RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 SSR3Q9UNL2 185 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 CEP250Q9BV73 2442 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 ZNF726A6NNF4 738 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 FAAHO00519 579 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 SIGLEC6O43699 453 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 TMCC2O75069 709 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 PLGP00747 810 aaPredicted RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 ZNF3P17036 446 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 DCDP81605 110 aaKnown RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 TXNL4AP83876 142 aaKnown RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 CRYZQ08257 329 aaKnown RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 ALG10BQ5I7T1 473 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 WASH2PQ6VEQ5 465 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 WDR20Q8TBZ3 569 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 STON2Q8WXE9 905 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 ASPNQ9BXN1 380 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 SMOC1Q9H4F8 434 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 LDAHQ9H6V9 325 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 WASH6PQ9NQA3 447 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 DCAF13Q9NV06 445 aaKnown RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 DNAJC27Q9NZQ0 273 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 PPT2Q9UMR5 302 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 DAPP1Q9UN19 280 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 RPL36Q9Y3U8 105 aaKnown RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 SPIN1Q9Y657 262 aaPredicted RBP8.55□□□□□ -1.04
LIG4-202ENST00000405925 ABCA7Q8IZY2 2146 aa8.55□□□□□ -1.04
LIG4-202ENST00000405925 C11orf98E9PRG8 122 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PGCP20142 388 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MPLP40238 635 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 EEF1A2Q05639 463 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 SNTA1Q13424 505 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MEP1AQ16819 746 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 SLC36A3Q495N2 470 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 C3orf38Q5JPI3 329 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 DCST2Q5T1A1 773 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ABHD17BQ5VST6 288 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 FRRS1Q6ZNA5 592 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ZNF583Q96ND8 569 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 AMDHD1Q96NU7 426 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 TREX2Q9BQ50 279 aaPredicted RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 MAGIXQ9H6Y5 334 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ZNF225Q9UK10 706 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 A0A1W2PR48 441 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 TMEM221A6NGB7 291 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 A8MVJ9 347 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 M0R296 226 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 WWP2O00308 870 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ARAFP10398 606 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ENDOUP21128 410 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 GPR4P46093 362 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MLLT10P55197 1068 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 ZP2Q05996 745 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 DMPKQ09013 629 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 AP1ARQ63HQ0 302 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 GPAT4Q86UL3 456 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 OR8H2Q8N162 312 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 CACTIN-AS1Q8N1I8 211 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 KBTBD8Q8NFY9 601 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MUS81Q96NY9 551 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 EDEM2Q9BV94 578 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 OSBPL10Q9BXB5 764 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PAIP1Q9H074 479 aaKnown RBP8.54□□□□□ -1.04
LIG4-202ENST00000405925 SLC6A20Q9NP91 592 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 HPF1Q9NWY4 346 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 MGAMO43451 1857 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 NSG1A0A0A6YYJ2 146 aa8.54□□□□□ -1.04
LIG4-202ENST00000405925 PRR23D1E9PI22 279 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms