RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 MAN2A2P49641 1150 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 RNF144AP50876 292 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 RHAGQ02094 409 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FUT5Q11128 374 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 MAP4K2Q12851 820 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ILKQ13418 452 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 DUSP7Q16829 419 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FHL5Q5TD97 284 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FIGNL1Q6PIW4 674 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CBLL1Q75N03 491 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 EIF3MQ7L2H7 374 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 SLCO6A1Q86UG4 719 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 BPHLQ86WA6 291 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 MARCH9Q86YJ5 346 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ARMC8Q8IUR7 673 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 EID3Q8N140 333 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GALNT4Q8N4A0 578 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ZNF321PQ8N8H1 164 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 GOLM1Q8NBJ4 401 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 PTPMT1Q8WUK0 201 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 METTL21AQ8WXB1 218 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 LZICQ8WZA0 190 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CTHRC1Q96CG8 243 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ZG16BQ96DA0 208 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 RMND5BQ96G75 393 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 GAL3ST4Q96RP7 486 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ZNF607Q96SK3 696 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 CIB1Q99828 191 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 RUBCNLQ9H714 662 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 FBXO8Q9NRD0 319 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ENAMQ9NRM1 1142 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 ARMC1Q9NVT9 282 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 THUMPD1Q9NXG2 353 aaKnown RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 GPN3Q9UHW5 284 aaPredicted RBP3.46□□□□□ -1.86
RTN4-208ENST00000404909 RIMS3Q9UJD0 308 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 C3orf18Q9UK00 162 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 DTX4Q9Y2E6 619 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 U3KQV3 271 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 LAMA5O15230 3695 aa3.46□□□□□ -1.86
RTN4-208ENST00000404909 SPTBN4Q9H254 2564 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 PIEZO1Q92508 2521 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 A8MVJ9 347 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 PLD2O14939 933 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 COQ9O75208 318 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 E2F6O75461 281 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 SERPINB7O75635 380 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 SLITRK5O94991 958 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 LDLRP01130 860 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 S1PR1P21453 382 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 RORAP35398 523 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 VHLP40337 213 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 EMP2P54851 167 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 SELENOWP63302 87 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 IGLV3-21P80748 117 aaPredicted RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 CHRNEQ04844 493 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 DUSP8Q13202 625 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 GNA13Q14344 377 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 MYBPC3Q14896 1274 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 ZNHIT3Q15649 155 aaPredicted RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 GPR68Q15743 365 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 MAPK11Q15759 364 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 HMBOX1Q6NT76 420 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 CDC73Q6P1J9 531 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 OVCH1Q7RTY7 1134 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 ERMP1Q7Z2K6 904 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 PATL1Q86TB9 770 aaKnown RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 KRT73Q86Y46 540 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 ZDHHC21Q8IVQ6 265 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 LGI4Q8N135 537 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 CDRT4Q8N9R6 151 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 OR4N2Q8NGD1 307 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 C16orf52Q8NHV5 167 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 C8orf44Q96CB5 159 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 DOHHQ9BU89 302 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 CRB3Q9BUF7 120 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 OR10A5Q9H207 317 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 GIN1Q9NXP7 522 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 NTMQ9P121 344 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 OR10H1Q9Y4A9 318 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 HEMK1Q9Y5R4 338 aaPredicted RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 DCHS1Q96JQ0 3298 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 URB1O60287 2271 aaKnown RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 MAP1BP46821 2468 aaKnown RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 IGKV3D-11A0A0A0MRZ8 115 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 NPIPA5A0A0B4J1W7 369 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 TCRBV16S1A1N1A0A5B0 115 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 GXYLT2A0PJZ3 443 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 B4E171 279 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 C9J4A7 227 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 NPIPA7E9PJI5 369 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 PDLIM1O00151 329 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 CLOCKO15516 846 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 PRAMEF2O60811 474 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 CNOT3O75175 753 aaKnown RBP3.45□□□□□ -1.86
RTN4-208ENST00000404909 PDE9AO76083 593 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 STK17BO94768 372 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 RECKO95980 971 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 FABP3P05413 133 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 FTH1P19P0C7X4 201 aa3.45□□□□□ -1.86
RTN4-208ENST00000404909 NPIPA8P0DM63 369 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms