RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 SOX8P57073 446 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 RUNDC3AQ59EK9 446 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 B3GNTL1Q67FW5 361 aaPredicted RBP30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 H3F3CQ6NXT2 135 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 CDRT4Q8N9R6 151 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 SLC16A11Q8NCK7 471 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 SNRNP27Q8WVK2 155 aaKnown RBP30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 SLC9A6Q92581 669 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 ROPN1LQ96C74 230 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 ACTRT3Q9BYD9 372 aa30.83■■■□□ 2.53
CSNK1E-204ENST00000403904 WWP2O00308 870 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 PSG6Q00889 435 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 SLC5A8Q8N695 610 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 ZNF441Q8N8Z8 693 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 FBXO27Q8NI29 283 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 APOBEC4Q8WW27 367 aaKnown RBP30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 CRELD1Q96HD1 420 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 CNTNAP3BQ96NU0 1288 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 CNTNAP3Q9BZ76 1288 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 NXF5Q9H1B4 397 aaKnown RBP30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 IKZF5Q9H5V7 419 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 CDCP1Q9H5V8 836 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 MYOTQ9UBF9 498 aa30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 GPR55Q9Y2T6 319 aaPredicted RBP30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 MAP1BP46821 2468 aaKnown RBP30.82■■■□□ 2.52
CSNK1E-204ENST00000403904 MAN1A2O60476 641 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 CT45A8P0DMV1 189 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 CT45A9P0DMV2 189 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 ACP2P11117 423 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 CALB2P22676 271 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 PPICP45877 212 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 NR0B1P51843 470 aaKnown RBP30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 ZNHIT3Q15649 155 aaPredicted RBP30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 CT45A2Q5DJT8 189 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 COX20Q5RI15 118 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 DDX59Q5T1V6 619 aaKnown RBP eCLIP30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 IRAK1BP1Q5VVH5 260 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 ZCCHC12Q6PEW1 402 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 OR5D16Q8NGK9 328 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 BTBD9Q96Q07 612 aa30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 LMF2Q9BU23 707 aaKnown RBP30.81■■■□□ 2.52
CSNK1E-204ENST00000403904 MAP3K8P41279 467 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 MVDP53602 400 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 MTPNP58546 118 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 NANOGP8Q6NSW7 305 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 CDC73Q6P1J9 531 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 TNFAIP8L2Q6P589 184 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 NPSR1Q6W5P4 371 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 RPS19BP1Q86WX3 136 aaKnown RBP30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 SLC44A2Q8IWA5 706 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 HOXB13Q92826 284 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 LCORQ96JN0 433 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 CPPED1Q9BRF8 314 aaPredicted RBP30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 OR51I1Q9H343 314 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 NANOGQ9H9S0 305 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 GPR83Q9NYM4 423 aa30.8■■■□□ 2.52
CSNK1E-204ENST00000403904 MAN2A2P49641 1150 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 MNAT1P51948 309 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 SELPLGQ14242 412 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 DUSP5Q16690 384 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 EXOSC6Q5RKV6 272 aaKnown RBP30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 OR2J2O76002 312 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 ALOX5P09917 674 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 DRD5P21918 477 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 GABRA3P34903 492 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 DCAF7P61962 342 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 BORAQ6PGQ7 559 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 HACD2Q6Y1H2 254 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 HORMAD2Q8N7B1 307 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 C17orf47Q8NEP4 570 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 FDCSPQ8NFU4 85 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 OR52N2Q8NGI0 321 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 GPR151Q8TDV0 419 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 ADAMTS15Q8TE58 950 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 TP53INP1Q96A56 240 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 OR7D2Q96RA2 312 aa30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 THUMPD3Q9BV44 507 aaKnown RBP30.79■■■□□ 2.52
CSNK1E-204ENST00000403904 PPIBP23284 216 aaKnown RBP30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 CRATP43155 626 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 ST13P50502 369 aaKnown RBP30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 MXRA7P84157 204 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 GABPB1Q06547 395 aaPredicted RBP30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 OR4N2Q8NGD1 307 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 MIPOL1Q8TD10 442 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 PIK3R3Q92569 461 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 SLC35A4Q96G79 324 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 GMEB1Q9Y692 573 aa30.78■■■□□ 2.52
CSNK1E-204ENST00000403904 FRG2CA6NGY1 282 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 EVPLLA8MZ36 301 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 B2RBV5 119 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 ZNF354AO60765 605 aaPredicted RBP30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 ITGA10O75578 1167 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 NKX2-2O95096 273 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 KRT16P08779 473 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 SLC6A2P23975 617 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 MLF1P58340 268 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 RGNQ15493 299 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 TBR1Q16650 682 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 RABL3Q5HYI8 236 aa30.77■■■□□ 2.52
CSNK1E-204ENST00000403904 ACER2Q5QJU3 275 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms