RNA–Protein interactions for RNA: ENST00000403433.5

CHTOP-205, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTOP, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-205ENST00000403433 TUBA1AQ71U36 451 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 VRK2Q86Y07 508 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 OR7G2Q8NG99 324 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 OR8J1Q8NGP2 316 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 WDR36Q8NI36 951 aaKnown RBP16.78■□□□□ 0.28
CHTOP-205ENST00000403433 ZFYVE21Q9BQ24 234 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 GSDMCQ9BYG8 508 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 CACYBPQ9HB71 228 aaKnown RBP16.78■□□□□ 0.28
CHTOP-205ENST00000403433 SLC25A19Q9HC21 320 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 ZBTB20Q9HC78 741 aaPredicted RBP16.78■□□□□ 0.28
CHTOP-205ENST00000403433 ANKHQ9HCJ1 492 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 FBXO8Q9NRD0 319 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 DNAJC27Q9NZQ0 273 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 CPNE7Q9UBL6 633 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 PILRAQ9UKJ1 303 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 DAPP1Q9UN19 280 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 ENTPD2Q9Y5L3 495 aa16.78■□□□□ 0.28
CHTOP-205ENST00000403433 PRAMEF26H0Y7S4 382 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 GSTM3P21266 225 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 TGFBR1P36897 503 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 SLC15A1P46059 708 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 SNRPNP63162 240 aaKnown RBP16.77■□□□□ 0.28
CHTOP-205ENST00000403433 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-205ENST00000403433 RUNX2Q13950 521 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 INAVAQ3KP66 663 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 MEDAGQ5VYS4 303 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 MFSD12Q6NUT3 480 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 CDC73Q6P1J9 531 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 USP43Q70EL4 1123 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 WDR53Q7Z5U6 358 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-205ENST00000403433 ABI3BPQ7Z7G0 1075 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 ZER1Q7Z7L7 766 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 MORN4Q8NDC4 146 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 ALOXE3Q9BYJ1 711 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 C6orf106Q9H6K1 298 aaPredicted RBP16.77■□□□□ 0.28
CHTOP-205ENST00000403433 PRDM9Q9NQV7 894 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 KLHL28Q9NXS3 571 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 NTMQ9P121 344 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 USP36Q9P275 1121 aaKnown RBP16.77■□□□□ 0.28
CHTOP-205ENST00000403433 PMF1-BGLAPU3KQ54 211 aa16.77■□□□□ 0.28
CHTOP-205ENST00000403433 LOC105369274A0A096LPK9 316 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 LOC102723532A0A0G2JNH3 316 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 FAM221BA6H8Z2 402 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 PRKAR1BP31321 381 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 IFNA8P32881 189 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 IFNGR2P38484 337 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 RGS6P49758 472 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 MED22Q15528 200 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 C1orf94Q6P1W5 598 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 OR4N4Q8N0Y3 316 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SLC22A18ASQ8N1D0 253 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SLC44A3Q8N4M1 653 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 IQCF1Q8N6M8 205 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 FLCNQ8NFG4 579 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 KBTBD8Q8NFY9 601 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 OR6Q1Q8NGQ2 317 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 GPBAR1Q8TDU6 330 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 PATE1Q8WXA2 126 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SLC35A4Q96G79 324 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SLIRPQ9GZT3 109 aaKnown RBP16.76■□□□□ 0.27
CHTOP-205ENST00000403433 ERGIC3Q9Y282 383 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 RPL36Q9Y3U8 105 aaKnown RBP16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SPACA6W5XKT8 324 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 CEP290O15078 2479 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 C2CD4DB7Z1M9 353 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 H0YGG7 62 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 TP53P04637 393 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-205ENST00000403433 EIF2S1P05198 315 aaKnown RBP16.76■□□□□ 0.27
CHTOP-205ENST00000403433 ALOX12P18054 663 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 PDX1P52945 283 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 ARF3P61204 181 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-205ENST00000403433 ITGADQ13349 1161 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 RGS21Q2M5E4 152 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 HEPHL1Q6MZM0 1159 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 ZNF655Q8N720 491 aaPredicted RBP16.76■□□□□ 0.27
CHTOP-205ENST00000403433 TCEANCQ8N8B7 351 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 OR52P1PQ8NH57 321 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SLC9A6Q92581 669 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 RSC1A1Q92681 617 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 CDS1Q92903 461 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 GDF15Q99988 308 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 LYRM4Q9HD34 91 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 FAIMQ9NVQ4 179 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 TBCCD1Q9NVR7 557 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 TVP23BQ9NYZ1 205 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 PTGFRNQ9P2B2 879 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 IFT52Q9Y366 437 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 KLK4Q9Y5K2 254 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 SLC22A7Q9Y694 548 aa16.76■□□□□ 0.27
CHTOP-205ENST00000403433 ARHGEF17Q96PE2 2063 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-205ENST00000403433 LOC100506127A0A0U1RQW1 187 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 ZNF860A6NHJ4 632 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 ZSCAN9O15535 394 aaPredicted RBP16.75■□□□□ 0.27
CHTOP-205ENST00000403433 FRS3O43559 492 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 IGHV4-34P06331 123 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 CCNYL3P0C7X3 344 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 CPMP14384 443 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 PVRP15151 417 aa16.75■□□□□ 0.27
CHTOP-205ENST00000403433 UBE2IP63279 158 aaKnown RBP16.75■□□□□ 0.27
CHTOP-205ENST00000403433 RELAQ04206 551 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms