RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 RTCAO00442 366 aaKnown RBP18.68■□□□□ 0.58
CCDC47-202ENST00000403162 COMTD1Q86VU5 262 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 C1GALT1C1Q96EU7 318 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 ZC3HAV1LQ96H79 300 aaKnown RBP18.68■□□□□ 0.58
CCDC47-202ENST00000403162 SOSTQ9BQB4 213 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 ZDHHC5Q9C0B5 715 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 MTG2Q9H4K7 406 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 CARD8Q9Y2G2 431 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 GSTK1Q9Y2Q3 226 aa18.68■□□□□ 0.58
CCDC47-202ENST00000403162 YARS2Q9Y2Z4 477 aaKnown RBP18.68■□□□□ 0.58
CCDC47-202ENST00000403162 C2CD4DB7Z1M9 353 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 M0R3H8 397 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 PRODHO43272 600 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 TRIM3O75382 744 aaPredicted RBP18.67■□□□□ 0.58
CCDC47-202ENST00000403162 EPHX1P07099 455 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 PRKCAP17252 672 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 GABRA5P31644 462 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 CCT3P49368 545 aaKnown RBP18.67■□□□□ 0.58
CCDC47-202ENST00000403162 HOXC5Q00444 222 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 SYPL1Q16563 259 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 CD200R1LQ6Q8B3 271 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 PARS2Q7L3T8 475 aaKnown RBP18.67■□□□□ 0.58
CCDC47-202ENST00000403162 CAMKK1Q8N5S9 505 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 MORN4Q8NDC4 146 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 TMEM163Q8TC26 289 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 UFD1Q92890 307 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 TRIM63Q969Q1 353 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 IL17FQ96PD4 163 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 ACSS1Q9NUB1 689 aaPredicted RBP18.67■□□□□ 0.58
CCDC47-202ENST00000403162 KLHL21Q9UJP4 597 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 NDRG2Q9UN36 371 aaKnown RBP18.67■□□□□ 0.58
CCDC47-202ENST00000403162 SPTBN5Q9NRC6 3674 aaKnown RBP18.67■□□□□ 0.58
CCDC47-202ENST00000403162 LRRK1Q38SD2 2015 aa18.67■□□□□ 0.58
CCDC47-202ENST00000403162 CSF2P04141 144 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 GSTM3P21266 225 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 MLC1Q15049 377 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SNAPC1Q16533 368 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 CRTC2Q53ET0 693 aaPredicted RBP18.66■□□□□ 0.58
CCDC47-202ENST00000403162 Q5BKY6 102 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 OR2G6Q5TZ20 316 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 TIGD3Q6B0B8 471 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SLC36A4Q6YBV0 504 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 MRGPREQ86SM8 312 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 PDZD3Q86UT5 571 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 IQCHQ86VS3 1027 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 ZNF547Q8IVP9 402 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 PLA2G15Q8NCC3 412 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 ATP6V1C2Q8NEY4 427 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 OR52P1PQ8NH57 321 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 RNFT2Q96EX2 444 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 ZNF514Q96K75 400 aaPredicted RBP18.66■□□□□ 0.58
CCDC47-202ENST00000403162 QRFPRQ96P65 431 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 F2RL3Q96RI0 385 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 GPA33Q99795 319 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 PELI2Q9HAT8 420 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 TRPV5Q9NQA5 729 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 ACOXLQ9NUZ1 547 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SLC9A8Q9Y2E8 581 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 EXOSC1Q9Y3B2 195 aaKnown RBP18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SNTNA6NMZ2 147 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 PROM1O43490 865 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 OR12D1P0DN82 309 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 MAP2K3P46734 347 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SLC6A11P48066 632 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 GAB4Q2WGN9 574 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SNAP47Q5SQN1 464 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 METAP1DQ6UB28 335 aaPredicted RBP18.66■□□□□ 0.58
CCDC47-202ENST00000403162 ETFBKMTQ8IXQ9 262 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 ANKRD53Q8N9V6 530 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SYT14Q8NB59 555 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 UBASH3BQ8TF42 649 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 EXOSC8Q96B26 276 aaKnown RBP18.66■□□□□ 0.58
CCDC47-202ENST00000403162 PPP1R3EQ9H7J1 279 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 SYNDIG1Q9H7V2 258 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 C5AR2Q9P296 337 aa18.66■□□□□ 0.58
CCDC47-202ENST00000403162 CHRM5P08912 532 aaPredicted RBP18.65■□□□□ 0.58
CCDC47-202ENST00000403162 CISD3P0C7P0 127 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 KELP23276 732 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 CD83Q01151 205 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 GPR19Q15760 415 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 MINDY4Q4G0A6 757 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PEX5LQ8IYB4 626 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 OR7G1Q8NGA0 311 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 OR2L2Q8NH16 312 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 RAD51AP1Q96B01 352 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 SLC35G5Q96KT7 338 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PRRC1Q96M27 445 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 GON7Q9BXV9 100 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 OR51I1Q9H343 314 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 RERGLQ9H628 205 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 DEC1Q9P2X7 70 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 K7ESM1 405 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 POP7O75817 140 aaKnown RBP18.65■□□□□ 0.58
CCDC47-202ENST00000403162 GAAP10253 952 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PTBP1P26599 531 aaKnown RBP eCLIP18.65■□□□□ 0.58
CCDC47-202ENST00000403162 ERP29P30040 261 aaKnown RBP18.65■□□□□ 0.58
CCDC47-202ENST00000403162 PPP2R1BP30154 601 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 SSTR4P31391 388 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 GALK2Q01415 458 aa18.65■□□□□ 0.58
CCDC47-202ENST00000403162 FABP5Q01469 135 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms