RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 C11orf42Q8N5U0 333 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 STEAP2Q8NFT2 490 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 OR10A5Q9H207 317 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 C1orf123Q9NWV4 160 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 STEAP1Q9UHE8 339 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ADAMTS6Q9UKP5 1117 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 TMEM127O75204 238 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 ITPRIPL2Q3MIP1 535 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SLC18B1Q6NT16 456 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 RPL22L1Q6P5R6 122 aaKnown RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 SERPINA11Q86U17 422 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 TMPRSS12Q86WS5 348 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 BPIFCQ8NFQ6 507 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 BARX1Q9HBU1 254 aaPredicted RBP8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 CISHQ9NSE2 258 aa8.23□□□□□ -1.09
CACNA1C-220ENST00000399655 PPP3CBP16298 524 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 AOAHP28039 575 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 FCGRTP55899 365 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 GRHL3Q8TE85 626 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 PMEPA1Q969W9 287 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ACSF2Q96CM8 615 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 KMT2EQ8IZD2 1858 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ANKRD30BLA7E2S9 258 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CAPN5O15484 640 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 YBX3P16989 372 aaKnown RBP eCLIP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 REP15Q6BDI9 236 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 OGFOD3Q6PK18 319 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ANKRD46Q86W74 232 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 THAP4Q8WY91 577 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ZNF514Q96K75 400 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 WDR77Q9BQA1 342 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 TARS2Q9BW92 718 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ACTL8Q9H568 366 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 H0YAE9 185 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CRHR1P34998 444 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 BST1Q10588 318 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 TSSK4Q6SA08 328 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ZNF620Q6ZNG0 422 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CPA6Q8N4T0 437 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 TRMT2BQ96GJ1 504 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 MED30Q96HR3 178 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ACKR4Q9NPB9 350 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 SLX4Q8IY92 1834 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 OR2C1O95371 312 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 FHP07954 510 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CNR1P21554 472 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 SHMT1P34896 483 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 RAP2BP61225 183 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 HERVK_113P62684 666 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 TAP2Q03519 686 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 KIAA1211LQ6NV74 962 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 OR5B3Q8NH48 314 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ELP4Q96EB1 424 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 C3orf30Q96M34 536 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 HAPLN3Q96S86 360 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 IL12RB2Q99665 862 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 PIGVQ9NUD9 493 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 AP5S1Q9NUS5 200 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 NRCAMQ92823 1304 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 NPEPPSL1A6NEC2 478 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 K7EPI3 171 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 SPATA31D3P0C874 917 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 UBE2NP61088 152 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CATR1Q13166 79 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CFAP77Q6ZQR2 320 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ZNF662Q6ZS27 426 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 SPATA31D4Q6ZUB0 917 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 NETO2Q8NC67 525 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 OR2T33Q8NG76 320 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 EXTL1Q92935 676 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 PIGQQ9BRB3 760 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 PIGMQ9H3S5 423 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ITM2CQ9NQX7 267 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 PLEKHJ1Q9NW61 149 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 MYOTQ9UBF9 498 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 BTRCQ9Y297 605 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 CACNG1Q06432 222 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 MS4A15Q8N5U1 240 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ZBTB2Q8N680 514 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 NUDT10Q8NFP7 164 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 NUDT11Q96G61 164 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 MECRQ9BV79 373 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 SEMA4AQ9H3S1 761 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 URB2Q14146 1524 aaKnown RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 KCNQ1P51787 676 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 FOXM1Q08050 763 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 FAM117BQ6P1L5 589 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 LGI4Q8N135 537 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 GPRC5AQ8NFJ5 357 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ECHDC3Q96DC8 303 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ADAP2Q9NPF8 381 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 PCDHB10Q9UN67 800 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 V9GYS6 101 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 ARHGEF40Q8TER5 1519 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 TRIP12Q14669 1992 aaPredicted RBP8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 SLC5A5Q92911 643 aa8.22□□□□□ -1.09
CACNA1C-220ENST00000399655 NKX3-1Q99801 234 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms