RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 SLCO2B1O94956 709 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SLITRK5O94991 958 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 INHBBP09529 407 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GSTT2P0CG29 244 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GSTT2BP0CG30 244 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 NAT2P11245 290 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PAICSP22234 425 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 CERS1P27544 350 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 IFNGR2P38484 337 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF91Q05481 1191 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF33BQ06732 778 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 COX10Q12887 443 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF155Q12901 538 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 FADDQ13158 208 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 MPEG1Q2M385 716 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF544Q6NX49 715 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TUBA3EQ6PEY2 450 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SMARCD3Q6STE5 483 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SLC36A4Q6YBV0 504 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 RNASE11Q8TAA1 199 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 GRHL3Q8TE85 626 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 COQ10AQ96MF6 247 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 BCL7BQ9BQE9 202 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 PIMREGQ9BSJ6 248 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SPATA9Q9BWV2 254 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 TP63Q9H3D4 680 aaPredicted RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SIAEQ9HAT2 523 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 C1GALT1Q9NS00 363 aa4.67□□□□□ -1.66
SMAD4-202ENST00000398417 YARS2Q9Y2Z4 477 aaKnown RBP4.67□□□□□ -1.66
SMAD4-202ENST00000398417 SLX4Q8IY92 1834 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KMOO15229 486 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 RDH16O75452 317 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TGM1P22735 817 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PRPH2P23942 346 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 RGS8P57771 180 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 LARS2Q15031 903 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GPR68Q15743 365 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF77Q15935 545 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZNF181Q2M3W8 571 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 C18orf63Q68DL7 685 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CCDC71Q8IV32 467 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 NRSN1Q8IZ57 195 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OR8J2Q8NGG1 315 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OR8J1Q8NGP2 316 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ZBED6CLQ96FA7 236 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PITX2Q99697 317 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SLC6A17Q9H1V8 727 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 BRD7Q9NPI1 651 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 HAT1O14929 419 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 DSCR3O14972 297 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 RHCEP18577 417 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 DDCP20711 480 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GCH1P30793 250 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 UGT2B10P36537 528 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 RGS1Q08116 209 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TGM3Q08188 693 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GPR19Q15760 415 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TMEM52BQ4KMG9 183 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 AGAP7PQ5VUJ5 663 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CPA6Q8N4T0 437 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 LCN9Q8WX39 176 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 LRR1Q96L50 414 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 HS6ST2Q96MM7 605 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GABARAPL3Q9BY60 117 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SAP130Q9H0E3 1048 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 QRSL1Q9H0R6 528 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KIF13BQ9NQT8 1826 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SLC30A4O14863 429 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 HMGN2P05204 90 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 POLR2CP19387 275 aaPredicted RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 S100A1P23297 94 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CHAF1BQ13112 559 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SEC23BQ15437 767 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PROX2Q3B8N5 592 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SLC30A6Q6NXT4 461 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MZT2BQ6NZ67 158 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PLCZ1Q86YW0 608 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 TMEFF1Q8IYR6 380 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 GPR151Q8TDV0 419 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PIGKQ92643 395 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 OPALINQ96PE5 141 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 FAM117AQ9C073 453 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SEMA4GQ9NTN9 838 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SLC23A2Q9UGH3 650 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ADAM30Q9UKF2 790 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ERVK-11Q9UQG0 969 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 EXOSC1Q9Y3B2 195 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 KCNE3Q9Y6H6 103 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MTCL1Q9Y4B5 1905 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 PRAMEF25A6NGN4 478 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CD8B2A6NJW9 211 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MRPS14O60783 128 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 CD8BP10966 210 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 IFI30P13284 250 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 IL1RNP18510 177 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 SSTR4P31391 388 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 RPS19P39019 145 aaKnown RBP4.66□□□□□ -1.66
SMAD4-202ENST00000398417 ACTR1BP42025 376 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 IL12RB1P42701 662 aa4.66□□□□□ -1.66
SMAD4-202ENST00000398417 MAGEA2P43356 314 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms