RNA–Protein interactions for RNA: ENST00000398238.8

NSF-201, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSF, Length 3,983 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSF-201ENST00000398238 VASPP50552 380 aaPredicted RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 SIM1P81133 766 aaPredicted RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 KCNJ8Q15842 424 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 ZC3H14Q6PJT7 736 aaKnown RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 DEPDC4Q8N2C3 294 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 TMEM255BQ8WV15 326 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 KLHL6Q8WZ60 621 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 ZBED6CLQ96FA7 236 aaPredicted RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 POLR2J2Q9GZM3 115 aaKnown RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 MED20Q9H944 212 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 V9GYH0 126 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 LOC105369274A0A096LPK9 316 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 LOC102723532A0A0G2JNH3 316 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 IMPDH2P12268 514 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 PVRP15151 417 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 GDI1P31150 447 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 RAB28P51157 221 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 FZD5Q13467 585 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 PDGFRLQ15198 375 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 ZIC1Q15915 447 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 CCBE1Q6UXH8 406 aaPredicted RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 WDR88Q6ZMY6 472 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 NRARPQ7Z6K4 114 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 CCDC190Q86UF4 302 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 OR4N4Q8N0Y3 316 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 OR4Q3Q8NH05 313 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 GIMAP5Q96F15 307 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 OR7D2Q96RA2 312 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 BBS4Q96RK4 519 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 MRPS30Q9NP92 439 aaKnown RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 TOR4AQ9NXH8 423 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 CNOT3O75175 753 aaKnown RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 UGT2B17O75795 530 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 BTN3A2P78410 334 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 LRRC32Q14392 662 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 MAPK14Q16539 360 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 ZNF542PQ5EBM4 170 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 OR5T3Q8NGG3 340 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 SLC35A4Q96G79 324 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 MIXL1Q9H2W2 232 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 CCDC86Q9H6F5 360 aaKnown RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 PELI2Q9HAT8 420 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 EHD3Q9NZN3 535 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 ZNF624Q9P2J8 865 aaPredicted RBP12.86□□□□□ -0.35
NSF-201ENST00000398238 TMCC3Q9ULS5 477 aa12.86□□□□□ -0.35
NSF-201ENST00000398238 FRYQ5TBA9 3013 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 SEMA3DO95025 777 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 LGI1O95970 557 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 ADAP00813 363 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 GKN3PP0CG01 181 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 RFX2P48378 723 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 SF3B4Q15427 424 aaKnown RBP eCLIP12.85□□□□□ -0.35
NSF-201ENST00000398238 RPE65Q16518 533 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 FCRLBQ6BAA4 426 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 ZNF438Q7Z4V0 828 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 ZNF557Q8N988 423 aaPredicted RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 OR9Q1Q8NGQ5 310 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 ZNF681Q96N22 645 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 PSD2Q9BQI7 771 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 RSPH9Q9H1X1 276 aaPredicted RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 SYNDIG1LA6NDD5 238 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 SCG5P05408 212 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 TBXA2RP21731 343 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 PKLRP30613 574 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 TRMT12Q53H54 448 aaKnown RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 TMEM196Q5HYL7 178 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 ATAD3BQ5T9A4 648 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 RBM12BQ8IXT5 1001 aaKnown RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 NANOGP1Q8N7R0 232 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 BCL7BQ9BQE9 202 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 HCAR1Q9BXC0 346 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 TESQ9UGI8 421 aaKnown RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 PRR19A6NJB7 356 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 CELA2BP08218 269 aaPredicted RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 ZNF888P0CJ79 500 aaPredicted RBP12.85□□□□□ -0.35
NSF-201ENST00000398238 GNSP15586 552 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 PLAURQ03405 335 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 MFSD4BQ5TF39 518 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 UBE2E3Q969T4 207 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 NELL2Q99435 816 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 FNDC11Q9BVV2 318 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 P2RX2Q9UBL9 471 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 MALT1Q9UDY8 824 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 KCNE5Q9UJ90 142 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 CSNK1G3Q9Y6M4 447 aa12.85□□□□□ -0.35
NSF-201ENST00000398238 C1QTNF3-AMACRE9PGA6 284 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 LDB3O75112 727 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 ASGR2P07307 311 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 HOXB6P17509 224 aaKnown RBP12.84□□□□□ -0.35
NSF-201ENST00000398238 DDX5P17844 614 aaKnown RBP12.84□□□□□ -0.35
NSF-201ENST00000398238 KIR2DL1P43626 348 aaPredicted RBP12.84□□□□□ -0.35
NSF-201ENST00000398238 KRT33BQ14525 404 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 MRM1Q6IN84 353 aaKnown RBP12.84□□□□□ -0.35
NSF-201ENST00000398238 FAM92BQ6ZTR7 304 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 ZAR1Q86SH2 424 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 OR1E3Q8WZA6 343 aa12.84□□□□□ -0.35
NSF-201ENST00000398238 FCGR1BQ92637 280 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms