RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 MTAPQ13126 283 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 HLXQ14774 488 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ATP6AP1Q15904 470 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 CCL15Q16663 113 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PHYHD1Q5SRE7 291 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 HACD2Q6Y1H2 254 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 H1FNTQ75WM6 255 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SVOPQ8N4V2 548 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 LINC01465Q8N7H1 131 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 L3MBTL4Q8NA19 623 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 OR1M1Q8NGA1 313 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 GRHL3Q8TE85 626 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ROPN1LQ96C74 230 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 OMDQ99983 421 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ULBP1Q9BZM6 244 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PKIBQ9C010 78 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ENKD1Q9H0I2 346 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ACSS2Q9NR19 701 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ACOXLQ9NUZ1 547 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 OR12D3Q9UGF7 316 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FBXW11Q9UKB1 542 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 OR52A4PA6NMU1 304 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 KDM4EB2RXH2 506 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 H3BML4 177 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 DFFAO00273 331 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PIRO00625 290 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PRMT5O14744 637 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FLRT2O43155 660 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SEPT4O43236 478 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 DEAF1O75398 565 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PAGE1O75459 146 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 RAF1P04049 648 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 MELTFP08582 738 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ZNF286BP0CG31 522 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SPI1P17947 270 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FGFR3P22607 806 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 DNASE1P24855 282 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FPR3P25089 353 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FASP25445 335 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PAX6P26367 422 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SUMO3P55854 103 aaPredicted RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ARHGAP1Q07960 439 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 HYAL2Q12891 473 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 BNIP2Q12982 314 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ITGADQ13349 1161 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 CTBP1Q13363 440 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 LRRC32Q14392 662 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PTGR1Q14914 329 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ZBTB6Q15916 424 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 ZFP69Q49AA0 526 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 C9orf152Q5JTZ5 239 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 GCNT6Q5T4J0 391 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 SYPL2Q5VXT5 272 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM45BPQ6NSW5 357 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 LRFN4Q6PJG9 635 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 TFAP2EQ6VUC0 442 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 YRDCQ86U90 279 aaKnown RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 GPAT4Q86UL3 456 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 CARM1Q86X55 608 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM47BQ8NA70 645 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 OR2V1Q8NHB1 315 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FAM45AQ8TCE6 357 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 C16orf78Q8WTQ4 265 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 NDRG1Q92597 394 aaKnown RBP6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.24□□□□□ -1.419e-7■■■■■ 54.9
TM9SF4-202ENST00000398022 PPP1R14AQ96A00 147 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 MAP3K3Q99759 626 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FICDQ9BVA6 458 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FTHL17Q9BXU8 183 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 PDGFCQ9NRA1 345 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 TMPRSS4Q9NRS4 437 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 NLGN3Q9NZ94 848 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 NPAP1Q9NZP6 1156 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 FBXO5Q9UKT4 447 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 KCNIP3Q9Y2W7 256 aa6.24□□□□□ -1.41
TM9SF4-202ENST00000398022 MYOCOSA0A1B0GUC4 107 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 NME2P1O60361 137 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 UROSP10746 265 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ARNTP27540 789 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CD68P34810 354 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 GRIA3P42263 894 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ATP4BP51164 291 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MRPS11P82912 194 aaKnown RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 NHLH2Q02577 135 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 GK3PQ14409 553 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 DUSP6Q16828 381 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 CYHR1Q6ZMK1 362 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MTSS1LQ765P7 747 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 DPPA4Q7L190 304 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 RRM2BQ7LG56 351 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 PTAR1Q7Z6K3 402 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 IGFN1Q86VF2 1251 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 LSRQ86X29 649 aaPredicted RBP6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 MIER2Q8N344 545 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 OR4D6Q8NGJ1 314 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SPPL2BQ8TCT7 592 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 SFT2D1Q8WV19 159 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 ZHX1-C8orf76Q96EF9 292 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 L3HYPDHQ96EM0 354 aa6.23□□□□□ -1.41
TM9SF4-202ENST00000398022 HOPXQ9BPY8 73 aaPredicted RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms