RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 ENPP2Q13822 863 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RPE65Q16518 533 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 C12orf73Q69YU5 71 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LSRQ86X29 649 aaPredicted RBP17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR4K5Q8NGD3 323 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ANKHQ9HCJ1 492 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 FGF22Q9HCT0 170 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 FRS3O43559 492 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PRR23CQ6ZRP0 262 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR2L5Q8NG80 312 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ZG16BQ96DA0 208 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OPALINQ96PE5 141 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MYADMQ96S97 322 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MTIF3Q9H2K0 278 aaKnown RBP17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SP140LQ9H930 580 aa17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 APOBEC3BQ9UH17 382 aaKnown RBP17.26■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CEP290O15078 2479 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3DA0A087WVF3 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3IA0A087WXS9 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3EA0A087X179 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3KA0A087X1G2 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3FA6NER0 549 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ISM1B1AKI9 464 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3LB9A6J9 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TLX2O43763 284 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PRKYO43930 277 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 EML2O95834 649 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3HP0C7X1 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ENPP1P22413 925 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PBX2P40425 430 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ZNF776Q68DI1 518 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3GQ6DHY5 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MRM1Q6IN84 353 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3CQ6IPX1 549 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PAQR6Q6TCH4 344 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TBC1D3Q8IZP1 549 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 POC5Q8NA72 575 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR4E2Q8NGC2 313 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 KLHL6Q8WZ60 621 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SLC9A8Q9Y2E8 581 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 A0A1W2PRQ8 180 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RNGTTO60942 597 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 GPX5O75715 221 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 UPK1BO75841 260 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 GTF2E2P29084 291 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SNRPNP63162 240 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ZNF91Q05481 1191 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LYPD8Q6UX82 237 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 FAM92BQ6ZTR7 304 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LYSMD2Q8IV50 215 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 FAM83FQ8NEG4 500 aaPredicted RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR9A2Q8NGT5 310 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 APOOQ9BUR5 198 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 RAB11FIP5Q9BXF6 653 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NXF2Q9GZY0 626 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MIR1-1HGQ9H1L0 117 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 EXOSC4Q9NPD3 245 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 C12orf4Q9NQ89 552 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NDOR1Q9UHB4 597 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ENTPD4Q9Y227 616 aa17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 YBX2Q9Y2T7 364 aaKnown RBP17.25■□□□□ 0.35
CHRFAM7A-202ENST00000397827 K7EQS6 105 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LINC01565O15544 149 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CSO75390 466 aaKnown RBP17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NTN1O95631 604 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 LGI1O95970 557 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PIPP12273 146 aaPredicted RBP17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SPNP16150 400 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 S100A5P33763 92 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MC3RP41968 323 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SMIM11AP58511 58 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ERVK-21P61565 698 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 SUZ12Q15022 739 aaKnown RBP17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 KCT2Q8NC54 265 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 OR8J1Q8NGP2 316 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MAP6Q96JE9 813 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 DEPDC7Q96QD5 511 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CITED4Q96RK1 184 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TMEM246Q9BRR3 403 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TSSK6Q9BXA6 273 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 HHATLQ9HCP6 504 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ZSCAN32Q9NX65 697 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CAB39Q9Y376 341 aaPredicted RBP17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TRBV23OR9-2A0A075B6M9 112 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PRR19A6NJB7 356 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 WWP2O00308 870 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TSPAN9O75954 239 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 KIR2DL1P43626 348 aaPredicted RBP17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 STEAP3Q658P3 488 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ACSM5Q6NUN0 579 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 C19orf48Q6RUI8 117 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 NUDT18Q6ZVK8 323 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 PARP16Q8N5Y8 322 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 BBS10Q8TAM1 723 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TMEM80Q96HE8 168 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 TAPBPLQ9BX59 468 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CCDC59Q9P031 241 aaKnown RBP17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 ZNF221Q9UK13 617 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 CA5BQ9Y2D0 317 aa17.24■□□□□ 0.35
CHRFAM7A-202ENST00000397827 MAU2Q9Y6X3 613 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 647.5 ms