RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 PPIBP23284 216 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 GPC1P35052 558 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 PIGAP37287 484 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 IST1P53990 364 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 KEAP1Q14145 624 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 PPP1R3BQ86XI6 285 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 OR5AK3PQ8NH89 298 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 MIPOL1Q8TD10 442 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 LHPPQ9H008 270 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 SIRT3Q9NTG7 399 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 ACSL6Q9UKU0 697 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 WDR87Q6ZQQ6 2873 aa18.11■□□□□ 0.49
PDLIM2-204ENST00000397760 SLC1A7O00341 560 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 FGF17O60258 216 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 GPR75O95800 540 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 ID2Q02363 134 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 C1orf189Q5VU69 101 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 PIP4P1Q86T03 277 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 LRRC25Q8N386 305 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 PIK3C3Q8NEB9 887 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 PSMA8Q8TAA3 256 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 NAA50Q9GZZ1 169 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 FAIMQ9NVQ4 179 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 MRPS33Q9Y291 106 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 SPTBP11277 2137 aa18.1■□□□□ 0.49
PDLIM2-204ENST00000397760 SEMG1P04279 462 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 CCKBRP32239 447 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 CHI3L1P36222 383 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 XCR1P46094 333 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 VEZF1Q14119 521 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 ERV3-1Q14264 604 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 MEP1AQ16819 746 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 CTU2Q2VPK5 515 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 SPDYE7PQ495Y7 208 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 OR2T5Q6IEZ7 315 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 RHBDD2Q6NTF9 364 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 PWWP2BQ6NUJ5 590 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 ANGPTL8Q6UXH0 198 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 GPR155Q7Z3F1 870 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 TMEM179BQ7Z7N9 219 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 BPHLQ86WA6 291 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 C10orf111Q8N326 155 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 OR2T29Q8NH02 315 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 COL26A1Q96A83 441 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 RNF31Q96EP0 1072 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 NODALQ96S42 347 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 YIPF2Q9BWQ6 316 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 ZNF304Q9HCX3 659 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 APMAPQ9HDC9 416 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 CORO2BQ9UQ03 480 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 BLACEA4D250 179 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 BCKDKO14874 412 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 B4GALT2O60909 372 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 SCRG1O75711 98 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 TIAF1O95411 115 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 HTR1AP08908 422 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 CPMP14384 443 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 PORP16435 677 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 IL7RP16871 459 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 PTGER1P34995 402 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 INSM1Q01101 510 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 DSG2Q14126 1118 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 IL11RAQ14626 422 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 VMACQ2NL98 169 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 PIWIL3Q7Z3Z3 882 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 ANKRD13BQ86YJ7 626 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 ZNF595Q8IYB9 648 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 SMYD1Q8NB12 490 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 TRUB1Q8WWH5 349 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 ANKRD9Q96BM1 317 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 DPH2Q9BQC3 489 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 B3GNT3Q9Y2A9 372 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 MAP4K5Q9Y4K4 846 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 OTOGLQ3ZCN5 2332 aa18.09■□□□□ 0.49
PDLIM2-204ENST00000397760 SPEGQ15772 3267 aa18.08■□□□□ 0.49
PDLIM2-204ENST00000397760 ADAMTS20P59510 1910 aa18.08■□□□□ 0.49
PDLIM2-204ENST00000397760 CLDN4O14493 209 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 CDC123O75794 336 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 KRT75O95678 551 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 FGF5P12034 268 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 CCL4P13236 92 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 FPR1P21462 350 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 FBLP22087 321 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 IGFBP5P24593 272 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 DNAJA1P31689 397 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 RANBP1P43487 201 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 CCT3P49368 545 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 CDK5R2Q13319 367 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 RGNQ15493 299 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 TRIP6Q15654 476 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 LAIR2Q6ISS4 152 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 EIF3MQ7L2H7 374 aaKnown RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 HS3ST5Q8IZT8 346 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 BMPERQ8N8U9 685 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 OR9A2Q8NGT5 310 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 FKBP10Q96AY3 582 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 CTRCQ99895 268 aa18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 TMEM121BQ9BXQ6 578 aaPredicted RBP18.08■□□□□ 0.48
PDLIM2-204ENST00000397760 SEMA3GQ9NS98 782 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms