RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 GABRA3P34903 492 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 DLSTP36957 453 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 POLE2P56282 527 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 ZNF630Q2M218 657 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-204ENST00000397443 GPAT3Q53EU6 434 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 PAPD4Q6PIY7 484 aaKnown RBP19.7■□□□□ 0.74
CPNE1-204ENST00000397443 ZNF615Q8N8J6 731 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 ANKFN1Q8N957 763 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 CDRT4Q8N9R6 151 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 ZNF578Q96N58 590 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-204ENST00000397443 NUDT9Q9BW91 350 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 MUC13Q9H3R2 512 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 C19orf25Q9UFG5 118 aaPredicted RBP19.7■□□□□ 0.74
CPNE1-204ENST00000397443 TCFL5Q9UL49 500 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 FARSAQ9Y285 508 aaKnown RBP19.7■□□□□ 0.74
CPNE1-204ENST00000397443 PADI2Q9Y2J8 665 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 AK5Q9Y6K8 562 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 PIEZO1Q92508 2521 aa19.7■□□□□ 0.74
CPNE1-204ENST00000397443 KRT36O76013 467 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 ALOX5P09917 674 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 TFPTP0C1Z6 253 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 RFX3P48380 749 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 SLC37A1P57057 533 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 RPS15P62841 145 aaKnown RBP19.69■□□□□ 0.74
CPNE1-204ENST00000397443 RBBP4Q09028 425 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 FUT5Q11128 374 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 RNF111Q6ZNA4 994 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 C16orf62Q7Z3J2 963 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 HMGN2P46Q86SG4 172 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 GAL3ST4Q96RP7 486 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 A4GALTQ9NPC4 353 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 COPS7AQ9UBW8 275 aa19.69■□□□□ 0.74
CPNE1-204ENST00000397443 SERPINA1P01009 418 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 OPN1SWP03999 348 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 F8A1P23610 371 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 OTX2P32243 289 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 STAT5AP42229 794 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 FOXC1Q12948 553 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 DNASE1L3Q13609 305 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 ZNHIT3Q15649 155 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-204ENST00000397443 CCNJQ5T5M9 372 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 ATAD3BQ5T9A4 648 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 TMEM205Q6UW68 189 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 COX18Q8N8Q8 333 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 C7orf57Q8NEG2 295 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 LPAR4Q99677 370 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 ITPAQ9BY32 194 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 ANGPT4Q9Y264 503 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 FREM2Q5SZK8 3169 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 LOC101059948A0A1B0GTJ6 334 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 DUXAA6NLW8 204 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 A8MVJ9 347 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 ZNF682O95780 498 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 IGKV3-11P04433 115 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 IFI6P09912 130 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 VEZF1Q14119 521 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 TGIF1Q15583 401 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 MAPK11Q15759 364 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 FBXW10Q5XX13 1052 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 REEP3Q6NUK4 255 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 IL22RA1Q8N6P7 574 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 OR7G1Q8NGA0 311 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 VSTM2LQ96N03 204 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 WDR77Q9BQA1 342 aaPredicted RBP19.68■□□□□ 0.74
CPNE1-204ENST00000397443 GORASP2Q9H8Y8 452 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 ASCL3Q9NQ33 180 aa19.68■□□□□ 0.74
CPNE1-204ENST00000397443 THUMPD1Q9NXG2 353 aaKnown RBP19.68■□□□□ 0.74
CPNE1-204ENST00000397443 MRPS18BQ9Y676 258 aaKnown RBP19.68■□□□□ 0.74
CPNE1-204ENST00000397443 GXYLT2A0PJZ3 443 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 SAGE2PA6NJ88 616 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 CDRT15L2A8MXV6 281 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 GCM2O75603 506 aaPredicted RBP19.67■□□□□ 0.74
CPNE1-204ENST00000397443 SPINK2P20155 84 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 KDELR2P33947 212 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 PSG6Q00889 435 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 OR4N2Q8NGD1 307 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 OR1N1Q8NGS0 311 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 FAM110BQ8TC76 370 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 ART5Q96L15 291 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 SEPHS2Q99611 448 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 PIGUQ9H490 435 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 RUBCNLQ9H714 662 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 EXD2Q9NVH0 621 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 AURKCQ9UQB9 309 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 HS3ST3B1Q9Y662 390 aa19.67■□□□□ 0.74
CPNE1-204ENST00000397443 SYNDIG1LA6NDD5 238 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 ASNA1O43681 348 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 H6PDO95479 791 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 CHRM4P08173 479 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 RAB40ALP0C0E4 278 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 FIGNL1Q6PIW4 674 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 ENPP6Q6UWR7 440 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 FAM86B1Q8N7N1 296 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 MORN4Q8NDC4 146 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 B3GNT7Q8NFL0 401 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 RMND5BQ96G75 393 aaPredicted RBP19.66■□□□□ 0.74
CPNE1-204ENST00000397443 TREX2Q9BQ50 279 aaPredicted RBP19.66■□□□□ 0.74
CPNE1-204ENST00000397443 NRSN2Q9GZP1 204 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 PRODH2Q9UF12 536 aa19.66■□□□□ 0.74
CPNE1-204ENST00000397443 TCRBV5S2A0A599 114 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms