RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 OR2L13Q8N349 312 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 ST6GALNAC3Q8NDV1 305 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 NUP43Q8NFH3 380 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 OR2M7Q8NG81 312 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 DIO2Q92813 273 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 OMA1Q96E52 524 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 VSTM2LQ96N03 204 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 SEC14L3Q9UDX4 400 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 SNX8Q9Y5X2 465 aa23.36■■□□□ 1.33
TSPAN4-207ENST00000397411 NPIPA5E9PKD4 350 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 TFECO14948 347 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 ATP8B1O43520 1251 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 PPM1BO75688 479 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 IFI6P09912 130 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 MST1P26927 711 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 PIGAP37287 484 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 CLNS1AP54105 237 aaKnown RBP23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 CORO7P57737 925 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 C21orf58P58505 322 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 KCNJ2P63252 427 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 MLC1Q15049 377 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 SPDYE7PQ495Y7 208 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 ZNF324BQ6AW86 544 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 GFRALQ6UXV0 394 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 NUP54Q7Z3B4 507 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 SLC34A3Q8N130 599 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 VPS37AQ8NEZ2 397 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 PRR7Q8TB68 274 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 ACTRT2Q8TDY3 377 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 PAQR8Q8TEZ7 354 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 ZBTB18Q99592 522 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 TSPAN10Q9H1Z9 355 aaPredicted RBP23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 EQTNQ9NQ60 294 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 PCDHGB4Q9UN71 923 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 NPIPA1Q9UND3 350 aa23.35■■□□□ 1.33
TSPAN4-207ENST00000397411 ABCB1P08183 1280 aaPredicted RBP23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 UQCRFS1P47985 274 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 DNASE1L1P49184 302 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 PSPHP78330 225 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 PRR5P85299 388 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 ESPL1Q14674 2120 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 EIF2S3LQ2VIR3 472 aaKnown RBP23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 PRAMEF20Q5VT98 475 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 FBXW8Q8N3Y1 598 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 TMBIM1Q969X1 311 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 BTBD9Q96Q07 612 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 SLX1AQ9BQ83 275 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 CLMPQ9H6B4 373 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 MED4Q9NPJ6 270 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 DEPPQ9NTK1 212 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 AIG1Q9NVV5 245 aa23.34■■□□□ 1.33
TSPAN4-207ENST00000397411 FASNP49327 2511 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 NINQ8N4C6 2090 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 ACOT7O00154 380 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 TO15178 435 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 UNC5CO95185 931 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 TGDSO95455 350 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 C6orf47O95873 294 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 CT45A8P0DMV1 189 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 CT45A9P0DMV2 189 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 IL12BP29460 328 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 KRTCAP3Q53RY4 240 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 CT45A2Q5DJT8 189 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 OR4F3Q6IEY1 312 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 EPGNQ6UW88 154 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 ZFP62Q8NB50 900 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 SPPL2AQ8TCT8 520 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 JSRP1Q96MG2 331 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 Q9N2J8 555 aa23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 CHCHD2Q9Y6H1 151 aaPredicted RBP23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 SEC23IPQ9Y6Y8 1000 aaKnown RBP23.33■■□□□ 1.33
TSPAN4-207ENST00000397411 NUP214P35658 2090 aaPredicted RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 ZGRF1Q86YA3 2104 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 TTC36A6NLP5 189 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 UBDO15205 165 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 ALDOCP09972 364 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 IDO1P14902 403 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 S100A3P33764 101 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 GABRA3P34903 492 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 KIR3DL1P43629 444 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 PPIAP62937 165 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 RBPJQ06330 500 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 VPS26BQ4G0F5 336 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 TBCELQ5QJ74 424 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 ANXA8L1Q5VT79 327 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 TMEM198Q66K66 360 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 MAVSQ7Z434 540 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 CAMKMTQ7Z624 323 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 CHMP6Q96FZ7 201 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 MAELQ96JY0 434 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 COL21A1Q96P44 957 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 OR52B2Q96RD2 323 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 SECISBP2Q96T21 854 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 DOHHQ9BU89 302 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 METTL7AQ9H8H3 244 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 SH2D2AQ9NP31 389 aa23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 ZCCHC3Q9NUD5 404 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 MRTO4Q9UKD2 239 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 CNOT11Q9UKZ1 510 aaKnown RBP23.32■■□□□ 1.32
TSPAN4-207ENST00000397411 BOKQ9UMX3 212 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms