RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 EMP2P54851 167 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 SELENOWP63302 87 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 GK3PQ14409 553 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 ZNF267Q14586 743 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 ZSWIM7Q19AV6 140 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 LRRC23Q53EV4 343 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 C6orf15Q6UXA7 325 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 ARMC8Q8IUR7 673 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 ESX1Q8N693 406 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 C17orf47Q8NEP4 570 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 OR52R1Q8NGF1 315 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 PTPMT1Q8WUK0 201 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 MAL2Q969L2 176 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 TREX2Q9BQ50 279 aaPredicted RBP17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 DOHHQ9BU89 302 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 OR10A5Q9H207 317 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 SERHL2Q9H4I8 314 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 PPIEQ9UNP9 301 aaKnown RBP17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 AURKCQ9UQB9 309 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 B3GALT1Q9Y5Z6 326 aa17.73■□□□□ 0.43
TSPAN4-204ENST00000397404 H0Y3Z8 333 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 DEAF1O75398 565 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 STK17BO94768 372 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 DLGAP3O95886 979 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 CT62P0C5K7 136 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 LCN1P31025 176 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 SLC5A2P31639 672 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 SOX18P35713 384 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 RPS26P62854 115 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 NCF4Q15080 339 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 IGF2-ASQ6U949 168 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 TMEM205Q6UW68 189 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 SLC9A6Q92581 669 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 MR1Q95460 341 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 SLC47A1Q96FL8 570 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 SENP5Q96HI0 755 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 VSTM2LQ96N03 204 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 SPSB2Q99619 263 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 BDH2Q9BUT1 245 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 MTHFD2LQ9H903 347 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 Q9N2J8 555 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 EQTNQ9NQ60 294 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 PNO1Q9NRX1 252 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 PISDQ9UG56 409 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 C3orf18Q9UK00 162 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 MRTO4Q9UKD2 239 aaKnown RBP17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 IFT52Q9Y366 437 aa17.72■□□□□ 0.43
TSPAN4-204ENST00000397404 FER1L5A0AVI2 2057 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 TM4SF5O14894 197 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 DPM1O60762 260 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 IGKV3-11P04433 115 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 ITGA2P17301 1181 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 MAGEA2P43356 314 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 EMDP50402 254 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 PSMD4P55036 377 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 ZNF155Q12901 538 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 CYBRD1Q53TN4 286 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 ERMP1Q7Z2K6 904 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 SLCO6A1Q86UG4 719 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 ZNF615Q8N8J6 731 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 COX18Q8N8Q8 333 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 OR5D16Q8NGK9 328 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 OR1N1Q8NGS0 311 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 CRB3Q9BUF7 120 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 G6PC3Q9BUM1 346 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 CNPPD1Q9BV87 410 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 FOLH1BQ9HBA9 442 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 ERVK-19Q9WJR5 959 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 GPC6Q9Y625 555 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 DSPPQ9NZW4 1301 aa17.71■□□□□ 0.43
TSPAN4-204ENST00000397404 C21orf140B9A014 251 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 M0QX08 132 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC30A4O14863 429 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 CASQ2O14958 399 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 STX11O75558 287 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 PRKD3O94806 890 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 BAG2O95816 211 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 TRHRP34981 398 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 GPAT3Q53EU6 434 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 MLIPQ5VWP3 458 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 RNF111Q6ZNA4 994 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 PIWIL3Q7Z3Z3 882 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC16A11Q8NCK7 471 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 OR2Y1Q8NGV0 311 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 OR8K3Q8NH51 312 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 FBXO30Q8TB52 745 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 SLC2A12Q8TD20 617 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 GEMIN6Q8WXD5 167 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 RAB8BQ92930 207 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 TSLPQ969D9 159 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 SLCO4A1Q96BD0 722 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 C16orf58Q96GQ5 468 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 BTBD9Q96Q07 612 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 LPAR4Q99677 370 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 CHID1Q9BWS9 393 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 TMEM121BQ9BXQ6 578 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 GPR87Q9BY21 358 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 SPRY4Q9C004 299 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 ARMC7Q9H6L4 198 aa17.7■□□□□ 0.42
TSPAN4-204ENST00000397404 IL1RAPQ9NPH3 570 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms