RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 THAP4Q8WY91 577 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 KAT2AQ92830 837 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 ELP4Q96EB1 424 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 GPR87Q9BY21 358 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 TGIF2Q9GZN2 237 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 PCDHAC1Q9H158 963 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 DDX18Q9NVP1 670 aaKnown RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 CTSFQ9UBX1 484 aa12.34□□□□□ -0.43
SEC13-209ENST00000397117 GPN3Q9UHW5 284 aaPredicted RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 NUP214P35658 2090 aaPredicted RBP12.34□□□□□ -0.43
SEC13-209ENST00000397117 OR2W5A6NFC9 320 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 A8MUI8 341 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 FAM220BPB1ANY3 271 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 HTR1EP28566 365 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 SOX11P35716 441 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 PGDP52209 483 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 IGLV3-21P80748 117 aaPredicted RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 FADDQ13158 208 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 KPNB1Q14974 876 aaKnown RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 FBXW10Q5XX13 1052 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 SAXO2Q658L1 398 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 CPZQ66K79 652 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 FAM199XQ6PEV8 388 aaPredicted RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 COX15Q7KZN9 410 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 OVCH1Q7RTY7 1134 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 DHFR2Q86XF0 187 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 PRSS58Q8IYP2 241 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 NUP43Q8NFH3 380 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 WDR60Q8WVS4 1066 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 RIT1Q92963 219 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 PPWD1Q96BP3 646 aaKnown RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 REXO5Q96IC2 774 aaKnown RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 SLC35G5Q96KT7 338 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 LRFN5Q96NI6 719 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 PELOQ9BRX2 385 aaKnown RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 SPATA9Q9BWV2 254 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 TRIM15Q9C019 465 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 MUC13Q9H3R2 512 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 SLC22A11Q9NSA0 550 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 C14orf105Q9NVL8 296 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 PTGFRNQ9P2B2 879 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 GMPR2Q9P2T1 348 aaKnown RBP12.33□□□□□ -0.43
SEC13-209ENST00000397117 EGFL7Q9UHF1 273 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 MKL2Q9ULH7 1088 aa12.33□□□□□ -0.43
SEC13-209ENST00000397117 CELSR2Q9HCU4 2923 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 ELOVL7A1L3X0 281 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 SYNDIG1LA6NDD5 238 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 PLOD2O00469 737 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 BCAS2O75934 225 aaPredicted RBP12.33□□□□□ -0.44
SEC13-209ENST00000397117 ONECUT2O95948 504 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 C1QCP02747 245 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 ZGLP1P0C6A0 271 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 TNNI3P19429 210 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 STT3AP46977 705 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 PRIM2P49643 509 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 ANXA11P50995 505 aaKnown RBP12.33□□□□□ -0.44
SEC13-209ENST00000397117 CASP9P55211 416 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 OR4D2P58180 307 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 RPS18P62269 152 aaKnown RBP12.33□□□□□ -0.44
SEC13-209ENST00000397117 MRPS35P82673 323 aaKnown RBP12.33□□□□□ -0.44
SEC13-209ENST00000397117 MS4A2Q01362 244 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 INPP5JQ15735 1006 aaPredicted RBP12.33□□□□□ -0.44
SEC13-209ENST00000397117 NSDHLQ15738 373 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 ZNF628Q5EBL2 1059 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 MLIPQ5VWP3 458 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 ZNF385CQ66K41 422 aaPredicted RBP12.33□□□□□ -0.44
SEC13-209ENST00000397117 ERICH5Q6P6B1 374 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 CALHM3Q86XJ0 350 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 GALNT12Q8IXK2 581 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 STT3BQ8TCJ2 826 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 ZNF675Q8TD23 568 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 MR1Q95460 341 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 FKBP10Q96AY3 582 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 LRGUKQ96M69 825 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 EPS8L2Q9H6S3 715 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 NECTIN3Q9NQS3 549 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 SNX13Q9Y5W8 968 aa12.33□□□□□ -0.44
SEC13-209ENST00000397117 IGLV3-12A0A075B6K2 115 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 C9J4A7 227 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 TGFBR3LH3BV60 316 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 DYRK3O43781 588 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 CEACAM4O75871 244 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 DDAH2O95865 285 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 ALBP02768 609 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 HEXBP07686 556 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 ETFAP13804 333 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 CCL11P51671 97 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 ACTR3P61158 418 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 RHAGQ02094 409 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 CHAF1BQ13112 559 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 PRICKLE4Q2TBC4 344 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 COX20Q5RI15 118 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 GCNT6Q5T4J0 391 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 MICU2Q8IYU8 434 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 VWA5B2Q8N398 1253 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 HIPK4Q8NE63 616 aa12.32□□□□□ -0.44
SEC13-209ENST00000397117 BHLHE22Q8NFJ8 381 aaPredicted RBP12.32□□□□□ -0.44
SEC13-209ENST00000397117 OR7G2Q8NG99 324 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms