RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TRHRP34981 398 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 C1DQ13901 141 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 KHDRBS2Q5VWX1 349 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 IKBIPQ70UQ0 350 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 TRAPPC5Q8IUR0 188 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 SLAIN1Q8ND83 568 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 HSD17B8Q92506 261 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ZNF689Q96CS4 500 aaPredicted RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 TEFMQ96QE5 360 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 GLIPR2Q9H4G4 154 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 ISG20L2Q9H9L3 353 aaKnown RBP13.11□□□□□ -0.31
NUP98-204ENST00000397004 CDH10Q9Y6N8 788 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 DOCK9Q9BZ29 2069 aa13.11□□□□□ -0.31
NUP98-204ENST00000397004 GABRA5P31644 462 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 CCT3P49368 545 aaKnown RBP13.1□□□□□ -0.31
NUP98-204ENST00000397004 CLDN20P56880 219 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 SNRPNP63162 240 aaKnown RBP13.1□□□□□ -0.31
NUP98-204ENST00000397004 C19orf57Q0VDD7 668 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 QRFPRQ96P65 431 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 MS4A8Q9BY19 250 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 TBC1D17Q9HA65 648 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 CD8B2A6NJW9 211 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 PDPK1O15530 556 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 LYRM1O43325 122 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 HOXA2O43364 376 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 CD8BP10966 210 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ENPP1P22413 925 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 BTCP35070 178 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 QPRTQ15274 297 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ZNF284Q2VY69 593 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 BTBD16Q32M84 506 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
NUP98-204ENST00000397004 TRMT11Q7Z4G4 463 aaKnown RBP13.1□□□□□ -0.31
NUP98-204ENST00000397004 SLC38A6Q8IZM9 456 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ENKURQ8TC29 256 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 COQ10AQ96MF6 247 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 SAGE1Q9NXZ1 904 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 SPG21Q9NZD8 308 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 EYSQ5T1H1 3165 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ELFN1P0C7U0 828 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ARSBP15848 533 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ELK1P19419 428 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 MTNR1AP48039 350 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 LY6G5CQ5SRR4 150 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 IL20RBQ6UXL0 311 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ZNF793Q6ZN11 406 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 TRIM69Q86WT6 500 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 FAM20CQ8IXL6 584 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 C16orf58Q96GQ5 468 aa13.1□□□□□ -0.31
NUP98-204ENST00000397004 ZC3H12DA2A288 527 aaKnown RBP13.09□□□□□ -0.31
NUP98-204ENST00000397004 MOSPD3O75425 235 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 C1QBP02746 253 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 IFI30P13284 250 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 SLC1A3P43003 542 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 LCN1P1Q5VSP4 162 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 PLET1Q6UQ28 207 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 KIAA1143Q96AT1 154 aaPredicted RBP13.09□□□□□ -0.31
NUP98-204ENST00000397004 TIFAQ96CG3 184 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 FOPNLQ96NB1 174 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 GON7Q9BXV9 100 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 OR52A5Q9H2C5 316 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 TAC3Q9UHF0 121 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 PRODHO43272 600 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 ICMTO60725 284 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
NUP98-204ENST00000397004 PRAMEF14Q5SWL7 426 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 FAM27D1Q5T7N8 215 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 PRAMEF13Q5VWM6 474 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 SIGIRRQ6IA17 410 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 SLC30A6Q6NXT4 461 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 SFTPA1Q8IWL2 248 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 IGKV1-8A0A0C4DH67 115 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 A0A1W2PPV9 198 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 H7BY64 318 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 GABRPO00591 440 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 CASKO14936 926 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 SNRNP200O75643 2136 aaKnown RBP13.09□□□□□ -0.31
NUP98-204ENST00000397004 CELP19835 753 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 RPL3P39023 403 aaKnown RBP13.09□□□□□ -0.31
NUP98-204ENST00000397004 OR3A3P47888 321 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 RAB8AP61006 207 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 RAB40BQ12829 278 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 ZNF805Q5CZA5 627 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 PRAP1Q96NZ9 151 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 WACQ9BTA9 647 aa13.09□□□□□ -0.31
NUP98-204ENST00000397004 HMX1Q9NP08 348 aaPredicted RBP13.09□□□□□ -0.31
NUP98-204ENST00000397004 C12orf71A8MTZ7 269 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 KDM4EB2RXH2 506 aaPredicted RBP13.08□□□□□ -0.31
NUP98-204ENST00000397004 KIAA0355O15063 1070 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 FKTNO75072 461 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 POP7O75817 140 aaKnown RBP13.08□□□□□ -0.31
NUP98-204ENST00000397004 ERP29P30040 261 aaKnown RBP13.08□□□□□ -0.31
NUP98-204ENST00000397004 TRIM23P36406 574 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 IL18Q14116 193 aa13.08□□□□□ -0.31
NUP98-204ENST00000397004 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms