RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 TGM3Q08188 693 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 TRMT12Q53H54 448 aaKnown RBP16.8■□□□□ 0.28
SREBF1-204ENST00000395756 PRSS48Q7RTY5 328 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 IQCHQ86VS3 1027 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 P2RY8Q86VZ1 359 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 TRIM69Q86WT6 500 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 SLC30A8Q8IWU4 369 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 CLIP4Q8N3C7 705 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 B3GNT7Q8NFL0 401 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 ADAMTS15Q8TE58 950 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 NECTIN4Q96NY8 510 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 NAALAD2Q9Y3Q0 740 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-204ENST00000395756 NOTOA8MTQ0 251 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 LIPAP38571 399 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 CDC42P60953 191 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 SLCO6A1Q86UG4 719 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 DNAJC22Q8N4W6 341 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 RERGQ96A58 199 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-204ENST00000395756 UCK2Q9BZX2 261 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 C8orf33Q9H7E9 229 aaPredicted RBP16.8■□□□□ 0.28
SREBF1-204ENST00000395756 C3orf14Q9HBI5 128 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 SLC13A4Q9UKG4 626 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 CA14Q9ULX7 337 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 A4GNTQ9UNA3 340 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 LOC100506127A0A0U1RQW1 187 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 A6NCN8 305 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 SHISA7A6NL88 538 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 CLCA1A8K7I4 914 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 EMC8O43402 210 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 BHLHB9Q6PI77 547 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 FLVCR1-AS1Q8TAF5 88 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 ZNF681Q96N22 645 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 IL21RQ9HBE5 538 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 TVP23BQ9NYZ1 205 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 PSORS1C1Q9UIG5 152 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 CORINQ9Y5Q5 1042 aa16.8■□□□□ 0.28
SREBF1-204ENST00000395756 MUC3AQ02505 3323 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 OR2W5A6NFC9 320 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 ZNF770Q6IQ21 691 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-204ENST00000395756 SVOPQ8N4V2 548 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 PSMA8Q8TAA3 256 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 RSC1A1Q92681 617 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 CDS1Q92903 461 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 GAL3ST3Q96A11 431 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 SIAEQ9HAT2 523 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 SLC9A8Q9Y2E8 581 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 CDC123O75794 336 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-204ENST00000395756 PDX1P52945 283 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 MAP4K2Q12851 820 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 KIR2DS3Q14952 304 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 SUZ12Q15022 739 aaKnown RBP16.79■□□□□ 0.28
SREBF1-204ENST00000395756 MLC1Q15049 377 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 MED22Q15528 200 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 BPHLQ86WA6 291 aaPredicted RBP16.79■□□□□ 0.28
SREBF1-204ENST00000395756 ANKRD13BQ86YJ7 626 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 SNX29P2Q8IUI4 249 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 CROCCP3Q8IVE0 287 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 SLC15A4Q8N697 577 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 DENND6BQ8NEG7 585 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 GPA33Q99795 319 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 RNF167Q9H6Y7 350 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 IL20RAQ9UHF4 553 aa16.79■□□□□ 0.28
SREBF1-204ENST00000395756 OR2A25A4D2G3 310 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 A8MU76 341 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 B3GALT2O43825 422 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 APOL3O95236 402 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 PCYT1AP49585 367 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 GPR68Q15743 365 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 ZC3H14Q6PJT7 736 aaKnown RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 DEPDC4Q8N2C3 294 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 OR4K14Q8NGD5 310 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 RNF31Q96EP0 1072 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 SLC35A4Q96G79 324 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 GPN2Q9H9Y4 310 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 NPIPA5A0A0B4J1W7 369 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 NPIPA7E9PJI5 369 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 SGK494L7N484 410 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 ENTPD6O75354 484 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 PTHP01270 115 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 ADRA2AP08913 450 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 NPIPA8P0DM63 369 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 CDH3P22223 829 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 UGT2B15P54855 530 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 TAS2R41P59536 307 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 SHC2P98077 582 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 NR1D2Q14995 579 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 TIGD6Q17RP2 521 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 PGBD2Q6P3X8 592 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 LRRC25Q8N386 305 aaPredicted RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 TCEANCQ8N8B7 351 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 TMEM52Q8NDY8 209 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 OR4K5Q8NGD3 323 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 OR56A1Q8NGH5 318 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 CNDP2Q96KP4 475 aaKnown RBP16.78■□□□□ 0.28
SREBF1-204ENST00000395756 SLC6A18Q96N87 628 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 ZFYVE21Q9BQ24 234 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 CCDC3Q9BQI4 270 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 MIR1-1HGQ9H1L0 117 aa16.78■□□□□ 0.28
SREBF1-204ENST00000395756 CCNB1IP1Q9NPC3 277 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms