RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 A4GNTQ9UNA3 340 aa13.5□□□□□ -0.25
CLIP2-203ENST00000395060 NPIPB8E9PQR5 432 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 HMGN4O00479 90 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 PSMB5P28074 263 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 PKLRP30613 574 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 HTRA3P83110 453 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 BNC1Q01954 994 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 TEKQ02763 1124 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM115Q12893 351 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 SP140Q13342 867 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 CDONQ4KMG0 1287 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 CDKL4Q5MAI5 379 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 HIST2H2AA3Q6FI13 130 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 CREB3L2Q70SY1 520 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 CACUL1Q86Y37 369 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 TEX47Q8TBZ9 253 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 ZG16BQ96DA0 208 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 OR2AG1Q9H205 316 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 EIF3KQ9UBQ5 218 aaKnown RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 PPIEQ9UNP9 301 aaKnown RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 SF3B6Q9Y3B4 125 aaKnown RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 IGLV3-16A0A075B6K0 115 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 GNSP15586 552 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 UQCRC2P22695 453 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 COX10Q12887 443 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 GRIN2CQ14957 1233 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 RRM2BQ7LG56 351 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 ADGRF3Q8IZF5 1079 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 FAM181AQ8N9Y4 354 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 GCDHQ92947 438 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 TRMT61BQ9BVS5 477 aaKnown RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 NIPAL2Q9H841 368 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 TEX10Q9NXF1 929 aaPredicted RBP13.49□□□□□ -0.25
CLIP2-203ENST00000395060 KCND3Q9UK17 655 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 CDH10Q9Y6N8 788 aa13.49□□□□□ -0.25
CLIP2-203ENST00000395060 K7ESM1 405 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SOCS6O14544 535 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 CHP2O43745 196 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 LEFTY1O75610 366 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SLC22A5O76082 557 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SLCO2B1O94956 709 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SOD1P00441 154 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 C1GALT1C1LP0DN25 315 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 FUT1P19526 365 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 DDCP20711 480 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SHC1P29353 583 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 PTGS2P35354 604 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SOX9P48436 509 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 TCEA2Q15560 299 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ZBTB37Q5TC79 503 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ASTLQ6HA08 431 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM91Q6ZNR0 172 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF767PQ75MW2 155 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 PRICKLE2Q7Z3G6 844 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 GPR135Q8IZ08 494 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 TMEM163Q8TC26 289 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SMG7Q92540 1137 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ECHDC3Q96DC8 303 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 PDXPQ96GD0 296 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 C12orf66Q96MD2 445 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 DEFB118Q96PH6 123 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 TEFMQ96QE5 360 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 VN1R3Q9BXE9 311 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 OR51I1Q9H343 314 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SERHL2Q9H4I8 314 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 PAK6Q9NQU5 681 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 IMP3Q9NV31 184 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 TESQ9UGI8 421 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 POLHQ9Y253 713 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SCN8AQ9UQD0 1980 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 A0A1W2PS29 197 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 PCP4L1A6NKN8 68 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 NPC1O15118 1278 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 UGDHO60701 494 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 HCN1O60741 890 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ATG13O75143 517 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 EIF4EP06730 217 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 MRPL3P09001 348 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 METAP1P53582 386 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 CRYZQ08257 329 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 LASP1Q14847 261 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 PIP5KL1Q5T9C9 394 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 FCRLBQ6BAA4 426 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 CAMKMTQ7Z624 323 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 COMMD7Q86VX2 200 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ANGPTL6Q8NI99 470 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 VOPP1Q96AW1 172 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ZNF354BQ96LW1 612 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 MARVELD1Q9BSK0 173 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 THAP7Q9BT49 309 aaPredicted RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 GTPBP2Q9BX10 602 aaKnown RBP13.48□□□□□ -0.25
CLIP2-203ENST00000395060 ZSCAN32Q9NX65 697 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 A0A1W2PRU2 124 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 FAM170BA6NMN3 283 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 RFPL3O75679 317 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 GIFP27352 417 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 IRS1P35568 1242 aa13.48□□□□□ -0.25
CLIP2-203ENST00000395060 SLC1A3P43003 542 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms