RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 NRG3P56975 720 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 PLCXD2Q0VAA5 305 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 SF3A3Q12874 501 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNCA-203ENST00000394986 RPS6KA2Q15349 733 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 FAM174BQ3ZCQ3 159 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 PDCD4Q53EL6 469 aaKnown RBP18.34■□□□□ 0.53
SNCA-203ENST00000394986 FAM180AQ6UWF9 173 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 SULF2Q8IWU5 870 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 NUP43Q8NFH3 380 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 OR4N2Q8NGD1 307 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 OR8J2Q8NGG1 315 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 FBXO30Q8TB52 745 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 FAM120BQ96EK7 910 aaKnown RBP18.34■□□□□ 0.53
SNCA-203ENST00000394986 FGFR1OP2Q9NVK5 253 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 MAPRE3Q9UPY8 281 aa18.34■□□□□ 0.53
SNCA-203ENST00000394986 KLF13Q9Y2Y9 288 aaPredicted RBP18.34■□□□□ 0.53
SNCA-203ENST00000394986 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 CFLARO15519 480 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 PEX1O43933 1283 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 SCN2BO60939 215 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 DRD5P21918 477 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 PIGAP37287 484 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 MDH1P40925 334 aaKnown RBP18.33■□□□□ 0.53
SNCA-203ENST00000394986 MEOX1P50221 254 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 DCAF7P61962 342 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 HBA1P69905 142 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 PSG6Q00889 435 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 INAQ16352 499 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 NTRK2Q16620 822 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 GSTA3Q16772 222 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 PRAMEF20Q5VT98 475 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 SLC44A2Q8IWA5 706 aaPredicted RBP18.33■□□□□ 0.53
SNCA-203ENST00000394986 OR9I1Q8NGQ6 314 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 OR5AK3PQ8NH89 298 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 OMA1Q96E52 524 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 HSPBAP1Q96EW2 488 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 GIMAP5Q96F15 307 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 OTUB1Q96FW1 271 aaPredicted RBP18.33■□□□□ 0.53
SNCA-203ENST00000394986 SGCZQ96LD1 299 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 CCDC28BQ9BUN5 200 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 SH2D2AQ9NP31 389 aa18.33■□□□□ 0.53
SNCA-203ENST00000394986 ZCCHC3Q9NUD5 404 aaKnown RBP18.33■□□□□ 0.53
SNCA-203ENST00000394986 PRRC2CQ9Y520 2896 aaKnown RBP18.33■□□□□ 0.52
SNCA-203ENST00000394986 EMC8O43402 210 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 WISP2O76076 250 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 VIMP08670 466 aaKnown RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 IFI6P09912 130 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 SOAT1P35610 550 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 FOXK1P85037 733 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 SPDYE7PQ495Y7 208 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 CGB2Q6NT52 195 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 PAOXQ6QHF9 649 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 CLEC4FQ8N1N0 589 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 NATD1Q8N6N6 113 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 BCORP1Q8N888 145 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 GOLM1Q8NBJ4 401 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 PAQR8Q8TEZ7 354 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 FAR1Q8WVX9 515 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 TMBIM1Q969X1 311 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 C16orf58Q96GQ5 468 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 FRMD6Q96NE9 622 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 MS4A4EQ96PG1 132 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 ZBTB18Q99592 522 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 YIPF4Q9BSR8 244 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 TSPAN10Q9H1Z9 355 aaPredicted RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 C3orf14Q9HBI5 128 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 SDR39U1Q9NRG7 319 aaPredicted RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 SACM1LQ9NTJ5 587 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 CHCHD2Q9Y6H1 151 aaPredicted RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 A0A0G2JND7 137 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 ASPDHA6ND91 283 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 RNASET2O00584 256 aaKnown RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 TO15178 435 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 ACOX3O15254 700 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 PPM1BO75688 479 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 SLC22A3O75751 556 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 MST1P26927 711 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 S100A3P33764 101 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 ZFP36L2P47974 494 aaKnown RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 DNASE1L1P49184 302 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 RNFT1Q5M7Z0 435 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 BICRALQ6AI39 1079 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 SLC34A3Q8N130 599 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 OR4A15Q8NGL6 344 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 PSMA8Q8TAA3 256 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 BARD1Q99728 777 aaKnown RBP18.32■□□□□ 0.52
SNCA-203ENST00000394986 CCDC134Q9H6E4 229 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 NEUROD4Q9HD90 331 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 OLAHQ9NV23 265 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 NTMQ9P121 344 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 OR10H1Q9Y4A9 318 aa18.32■□□□□ 0.52
SNCA-203ENST00000394986 UGT2B11O75310 529 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 CPSF4O95639 269 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 P04436 131 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 ACP2P11117 423 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 CCT3P49368 545 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 TMED10P49755 219 aaKnown RBP18.31■□□□□ 0.52
SNCA-203ENST00000394986 TP53BP2Q13625 1128 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 DPY19L1Q2PZI1 675 aa18.31■□□□□ 0.52
SNCA-203ENST00000394986 SLC22A10Q63ZE4 541 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms