RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 RGMAQ96B86 450 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ZBED6CLQ96FA7 236 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 DMRTB1Q96MA1 342 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 FNDC11Q9BVV2 318 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SPHK1Q9NYA1 384 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ACAD8Q9UKU7 415 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 BOLA1Q9Y3E2 137 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 DNMT3AQ9Y6K1 912 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 KNL1Q8NG31 2342 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 LRIT2A6NDA9 550 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 PDZK1P1A8MUH7 402 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC35G4P0C7Q5 338 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 TCEA1P23193 301 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 PCYT1AP49585 367 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 MAN2A2P49641 1150 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 GAS1P54826 345 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 RHAGQ02094 409 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 HNRNPA0Q13151 305 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 PRICKLE2Q7Z3G6 844 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 GATAD2AQ86YP4 633 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 MORN4Q8NDC4 146 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 OR2A1Q8NGT9 310 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ZFPM2Q8WW38 1151 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC9A6Q92581 669 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 TEX101Q9BY14 249 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 MIXL1Q9H2W2 232 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 NEUROD4Q9HD90 331 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ABCB9Q9NP78 766 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC35C2Q9NQQ7 365 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SPIN1Q9Y657 262 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A1W2PQU0 124 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 CPSF4LA6NMK7 179 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ERI3O43414 337 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ZIC2O95409 532 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 LALBAP00709 142 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 PIPP12273 146 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 CERS1P27544 350 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 GSTM5P46439 218 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 GIPRP48546 466 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 DAB2P98082 770 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 HYAL2Q12891 473 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 RPA4Q13156 261 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SLAMF1Q13291 335 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 GPAT3Q53EU6 434 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM196Q5HYL7 178 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 TMEM201Q5SNT2 666 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 ZNF776Q68DI1 518 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 NLGN4YQ8NFZ3 816 aaPredicted RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 OR8J1Q8NGP2 316 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 KAT2AQ92830 837 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC6A20Q9NP91 592 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 TXNL4BQ9NX01 149 aaKnown RBP12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 P2RX2Q9UBL9 471 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 CHST2Q9Y4C5 530 aa12.68□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A087WUU8 490 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 A0A1W2PQ09 198 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 ASNA1O43681 348 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 MPZL2O60487 215 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SEMA3DO95025 777 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SNX4O95219 450 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 TRHRP34981 398 aaPredicted RBP12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 COPZ1P61923 177 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 CHRNEQ04844 493 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SGCGQ13326 291 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SNAPC1Q16533 368 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 GLCCI1Q86VQ1 547 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 FGF11Q92914 225 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 BBS4Q96RK4 519 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 PELI2Q9HAT8 420 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 NDUFB11Q9NX14 153 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 MALT1Q9UDY8 824 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 NDOR1Q9UHB4 597 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC31A1O15431 190 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 DNAJB6O75190 326 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 CCNKO75909 580 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 NCR1O76036 304 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SLC2A10O95528 541 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 COL9A1P20849 921 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SDC2P34741 201 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 ETV6P41212 452 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 OR2B6P58173 313 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 NCF4Q15080 339 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 LHFPL3Q86UP9 236 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 FAM46AQ96IP4 442 aaKnown RBP12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 MND1Q9BWT6 205 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 S1PR5Q9H228 398 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 SEMA4GQ9NTN9 838 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 STUB1Q9UNE7 303 aa12.67□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
GTF2F1-201ENST00000394456 ZNF670-ZNF695F2Z2N8 137 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms