RNA–Protein interactions for RNA: ENST00000394303.7

CACNB1-202, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACNB1, Length 3,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-202ENST00000394303 GRPRP30550 384 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 MC3RP41968 323 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 B4GALNT1Q00973 533 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 ITPRIPL2Q3MIP1 535 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 GRHL2Q6ISB3 625 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 RTL4Q6ZR62 310 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 USP53Q70EK8 1073 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 MARCH9Q86YJ5 346 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 REM2Q8IYK8 340 aaPredicted RBP12.53□□□□□ -0.4
CACNB1-202ENST00000394303 SNX33Q8WV41 574 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 SLC7A6Q92536 515 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 SLC25A36Q96CQ1 311 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 PIP5K1AQ99755 562 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 BTBD1Q9H0C5 482 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 NMNAT1Q9HAN9 279 aaPredicted RBP12.53□□□□□ -0.4
CACNB1-202ENST00000394303 DMRT3Q9NQL9 472 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 MUTYHQ9UIF7 546 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 PPIEQ9UNP9 301 aaKnown RBP12.53□□□□□ -0.4
CACNB1-202ENST00000394303 PCDHGB2Q9Y5G2 931 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 SNX11Q9Y5W9 270 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 CCDC88CQ9P219 2028 aa12.53□□□□□ -0.4
CACNB1-202ENST00000394303 A0A1B0GVT2 93 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 A0A1W2PQ09 198 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 FAM86C2PA6NEL3 165 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 J3QLW9 94 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 WWP2O00308 870 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 RNGTTO60942 597 aaKnown RBP12.52□□□□□ -0.4
CACNB1-202ENST00000394303 KCNK5O95279 499 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 FHP07954 510 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 GKN3PP0CG01 181 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 ZNF19P17023 458 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 SCN1BQ07699 218 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 Q5BKY6 102 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 CCSAPQ6IQ19 270 aaPredicted RBP12.52□□□□□ -0.4
CACNB1-202ENST00000394303 LNX2Q8N448 690 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 NUP43Q8NFH3 380 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 HRASLS5Q96KN8 279 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 SLC17A9Q9BYT1 436 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 SLC22A4Q9H015 551 aa12.52□□□□□ -0.4
CACNB1-202ENST00000394303 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.4
CACNB1-202ENST00000394303 SCN2AQ99250 2005 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 DAPL1A0PJW8 107 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 PSMD9O00233 223 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 ARHGAP33O14559 1287 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 PGRMC2O15173 223 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 REM1O75628 298 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 CD160O95971 181 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 PSKH1P11801 424 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 KHKP50053 298 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 SELENOWP63302 87 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 CSTF1Q05048 431 aaKnown RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 ZNF267Q14586 743 aaPredicted RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 ZNF791Q3KP31 576 aaPredicted RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 YIF1BQ5BJH7 314 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 FRRS1Q6ZNA5 592 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 SPERTQ8NA61 448 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 C16orf58Q96GQ5 468 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 FAM46AQ96IP4 442 aaKnown RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 PITX2Q99697 317 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 H0Y8X5 98 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 BLOC1S5-TXNDC5H3BN57 136 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 SMAD9O15198 467 aaKnown RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 MYL9P24844 172 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 MAOBP27338 520 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 RFX2P48378 723 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 DBPQ10586 325 aaPredicted RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 BAK1Q16611 211 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 C12orf40Q86WS4 652 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 OR9A2Q8NGT5 310 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 OR8K3Q8NH51 312 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 OR4C6Q8NH72 309 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 ECHDC3Q96DC8 303 aa12.52□□□□□ -0.41
CACNB1-202ENST00000394303 PDCD11Q14690 1871 aaKnown RBP12.52□□□□□ -0.41
CACNB1-202ENST00000394303 DDX6P26196 483 aaKnown RBP eCLIP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 OR3A3P47888 321 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 CRISP1P54107 249 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 SNRPD2P62316 118 aaKnown RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 PTGES3Q15185 160 aaKnown RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 QPRTQ15274 297 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 DUSP7Q16829 419 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 HYAL4Q2M3T9 481 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 LSRQ86X29 649 aaPredicted RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 IQCF2Q8IXL9 164 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 TP53I13Q8NBR0 393 aaPredicted RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 TRIM43Q96BQ3 446 aaPredicted RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 NIPSNAP1Q9BPW8 284 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 MKRN2Q9H000 416 aaKnown RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 RPL36Q9Y3U8 105 aaKnown RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 CSNK1G3Q9Y6M4 447 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 CLCA3PQ9Y6N3 262 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 FAM171A2A8MVW0 826 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 H7C0S8 307 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 MEN1O00255 615 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 ZNF821O75541 412 aaPredicted RBP12.51□□□□□ -0.41
CACNB1-202ENST00000394303 HIST1H2ABP04908 130 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 GGT2P36268 569 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 CAV3P56539 151 aa12.51□□□□□ -0.41
CACNB1-202ENST00000394303 IRF3Q14653 427 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms