RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PPM1BO75688 479 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 CBX6O95503 412 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 CT45A8P0DMV1 189 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 CT45A9P0DMV2 189 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 CCL3P10147 92 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 EDN3P14138 238 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 PRKAG1P54619 331 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 PLCXD2Q0VAA5 305 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 ELOAQ14241 798 aaKnown RBP17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 ZNHIT3Q15649 155 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 CT45A2Q5DJT8 189 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 NUP54Q7Z3B4 507 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 SLC44A2Q8IWA5 706 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 SLC34A3Q8N130 599 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 OR2M7Q8NG81 312 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 OR10G3Q8NGC4 313 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 TESCQ96BS2 214 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 OMA1Q96E52 524 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 OR52B2Q96RD2 323 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 FAM173AQ9BQD7 235 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 SH2D2AQ9NP31 389 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 NTMQ9P121 344 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 GPR45Q9Y5Y3 372 aa17.49■□□□□ 0.39
PDLIM7-204ENST00000393546 EML6Q6ZMW3 1958 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 TTC36A6NLP5 189 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 G3V3Y1 287 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 ANKRD28O15084 1053 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 UBDO15205 165 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 CFLARO15519 480 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 REM1O75628 298 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 PSMG1O95456 288 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 C6orf47O95873 294 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 ABCB1P08183 1280 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 IDO1P14902 403 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 KRT20P35900 424 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 NME5P56597 212 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 CORO7P57737 925 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 FBXW4P57775 412 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 UFM1P61960 85 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 PRR5P85299 388 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 KCNC4Q03721 635 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 GSTA3Q16772 222 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 DPY19L1Q2PZI1 675 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 OR4F3Q6IEY1 312 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 GK5Q6ZS86 529 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 SZRD1Q7Z422 152 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 FBXW8Q8N3Y1 598 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 ZFP62Q8NB50 900 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 ST6GALNAC3Q8NDV1 305 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 VPS37AQ8NEZ2 397 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 OR8J2Q8NGG1 315 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 SECISBP2Q96T21 854 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 ZBTB18Q99592 522 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 SLX1AQ9BQ83 275 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 DEPPQ9NTK1 212 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 PCDHGB4Q9UN71 923 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 OR10H1Q9Y4A9 318 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 SNX8Q9Y5X2 465 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 CHCHD2Q9Y6H1 151 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 SVILO95425 2214 aa17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 NUP214P35658 2090 aaPredicted RBP17.48■□□□□ 0.39
PDLIM7-204ENST00000393546 SPENQ96T58 3664 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 ANKUB1A6NFN9 424 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 POLR3GO15318 223 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 ZNF24P17028 368 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 GNLYP22749 145 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 MST1P26927 711 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 PIGAP37287 484 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 KIR3DL1P43629 444 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 IDH3AP50213 366 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 AQP5P55064 265 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 PLGLB1Q02325 96 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 ANXA8L1Q5VT79 327 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 NPSR1Q6W5P4 371 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 PSMA8Q8TAA3 256 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 SPPL2AQ8TCT8 520 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 DIO2Q92813 273 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 TMBIM1Q969X1 311 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 LMF2Q9BU23 707 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 CLMPQ9H6B4 373 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 EQTNQ9NQ60 294 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 TCF7L2Q9NQB0 619 aa17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 SIRT3Q9NTG7 399 aaPredicted RBP17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 ZCCHC3Q9NUD5 404 aaKnown RBP17.47■□□□□ 0.39
PDLIM7-204ENST00000393546 PRSS51A0A1B0GVH4 220 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 ANKRD33BA6NCL7 494 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 E9PBE3 544 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 RNASET2O00584 256 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 ABCB7O75027 752 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 S100A3P33764 101 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 DNASE1L1P49184 302 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 CCT3P49368 545 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 WNT3P56703 355 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 PSG6Q00889 435 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 SPDYE7PQ495Y7 208 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 VPS26BQ4G0F5 336 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 CYP27C1Q4G0S4 372 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 PDCD4Q53EL6 469 aaKnown RBP17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 KRTCAP3Q53RY4 240 aa17.46■□□□□ 0.39
PDLIM7-204ENST00000393546 TBCELQ5QJ74 424 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms