RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 PDP1Q9P0J1 537 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 IFT80Q9P2H3 777 aaPredicted RBP8.07□□□□□ -1.12
TDP1-203ENST00000393454 FTSJ1Q9UET6 329 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 RARRES3Q9UL19 164 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 PCDHGA5Q9Y5G8 931 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ORC6Q9Y5N6 252 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 RALGAPA1Q6GYQ0 2036 aa8.07□□□□□ -1.12
TDP1-203ENST00000393454 ADAMTS20P59510 1910 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 J3KTA2 159 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 TNFRSF11BO00300 401 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ADAMDEC1O15204 470 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 COQ9O75208 318 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CBX7O95931 251 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ALBP02768 609 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ALPLP05186 524 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MSL3P1P0C860 447 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ETS2P15036 469 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 FPR1P21462 350 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 GABRA3P34903 492 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 GRK6P43250 576 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 STT3AP46977 705 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 KCNJ5P48544 419 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 IGLV3-21P80748 117 aaPredicted RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 KCNC4Q03721 635 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MAP4K2Q12851 820 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MERTKQ12866 999 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 DSG2Q14126 1118 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 GANABQ14697 944 aaKnown RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 IQCCQ4KMZ1 466 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 VWA2Q5GFL6 755 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ZNF311Q5JNZ3 666 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PRAMEF8Q5VWM4 474 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PRAMEF7Q5VXH5 474 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ANKRD34AQ69YU3 496 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 DEF8Q6ZN54 512 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CARM1Q86X55 608 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MARVELD2Q8N4S9 558 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 GPR32P1Q8NGA4 272 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 OR52J3Q8NH60 311 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PIK3R3Q92569 461 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 TFAP2CQ92754 450 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CTHRC1Q96CG8 243 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CLIP3Q96DZ5 547 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ZNF354BQ96LW1 612 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 BTBD2Q9BX70 525 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 OSBPL10Q9BXB5 764 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PIGUQ9H490 435 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 TRIM45Q9H8W5 580 aaPredicted RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 THSD1Q9NS62 852 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 KIF17Q9P2E2 1029 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PDP2Q9P2J9 529 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SLC13A4Q9UKG4 626 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MKLN1Q9UL63 735 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SRPK3Q9UPE1 567 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PCDHGB3Q9Y5G1 929 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ENPP4Q9Y6X5 453 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SEC16AO15027 2179 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MAGEA13PA6NCF6 341 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PRAMEF25A6NGN4 478 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 A8MUA0 341 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 HRKO00198 91 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 DLGAP1O14490 977 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 GALR2O43603 387 aaPredicted RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 HYAL3O43820 417 aaPredicted RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 FCMRO60667 390 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SCRG1O75711 98 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 HPRP00739 348 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 THRBP10828 461 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SSTR4P31391 388 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CSTF2P33240 577 aaKnown RBP eCLIP8.06□□□□□ -1.12
TDP1-203ENST00000393454 RFX3P48380 749 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CDH12P55289 794 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SERTAD2Q14140 314 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 GK3PQ14409 553 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PUM1Q14671 1186 aaKnown RBP eCLIP8.06□□□□□ -1.12
TDP1-203ENST00000393454 ZNHIT3Q15649 155 aaPredicted RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 ARHGAP11BQ3KRB8 267 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CCDC157Q569K6 752 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 CCNJQ5T5M9 372 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 KRT80Q6KB66 452 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 HEPHL1Q6MZM0 1159 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ZCCHC12Q6PEW1 402 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ISLR2Q6UXK2 745 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 TSEN54Q7Z6J9 526 aaKnown RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 CYP4Z1Q86W10 505 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 OR1F2PQ96R84 312 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 EPYCQ99645 322 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 BARD1Q99728 777 aaKnown RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 PIP5K1AQ99755 562 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 PELOQ9BRX2 385 aaKnown RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 SLC38A1Q9H2H9 487 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 SOX17Q9H6I2 414 aaPredicted RBP8.06□□□□□ -1.12
TDP1-203ENST00000393454 ENAMQ9NRM1 1142 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 LANCL2Q9NS86 450 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 UBAP1Q9NZ09 502 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 RHCGQ9UBD6 479 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 ERVK-19Q9WJR5 959 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 WDR45Q9Y484 360 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 MMACHCQ9Y4U1 282 aa8.06□□□□□ -1.12
TDP1-203ENST00000393454 FRYLO94915 3013 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms