RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 USP54Q70EL1 1684 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 IL12BP29460 328 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 RAP2BP61225 183 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 ERVK-25P63136 954 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 FGL2Q14314 439 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 KCTD18Q6PI47 426 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-203ENST00000391813 ABHD13Q7L211 337 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 SLC46A3Q7Z3Q1 461 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 KCNIP3Q9Y2W7 256 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 MYO9BQ13459 2157 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 LATS1O95835 1130 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 DPP6P42658 865 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 RRAS2P62070 204 aaPredicted RBP18.72■□□□□ 0.59
SHANK1-203ENST00000391813 FAM189BP81408 668 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 BTN1A1Q13410 526 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 LY6G5CQ5SRR4 150 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 DNAJC22Q8N4W6 341 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 METTL2AQ96IZ6 378 aaKnown RBP18.72■□□□□ 0.59
SHANK1-203ENST00000391813 INPP5KQ9BT40 448 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 NDUFS4O43181 175 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 FARS2O95363 451 aaKnown RBP18.72■□□□□ 0.59
SHANK1-203ENST00000391813 FHP07954 510 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 HOXB2P14652 356 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 SSTR4P31391 388 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 ADARB1P78563 741 aaKnown RBP18.72■□□□□ 0.59
SHANK1-203ENST00000391813 FAM214AQ32MH5 1076 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 ARHGAP11AQ6P4F7 1023 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 LRRTM4Q86VH4 590 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 Q9N2J8 555 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 B3GNT2Q9NY97 397 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 METTL15A6NJ78 407 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 FCER2P06734 321 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 MAGEA3P43357 314 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 WNT7BP56706 349 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 LRRC26Q2I0M4 334 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 RNASE10Q5GAN6 216 aaKnown RBP18.72■□□□□ 0.59
SHANK1-203ENST00000391813 CAMKVQ8NCB2 501 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 MCOLN1Q9GZU1 580 aa18.72■□□□□ 0.59
SHANK1-203ENST00000391813 STRCP1A6NGW2 1772 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 LOC102723532A0A0G2JNH3 316 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 UPK3BL1B0FP48 263 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 UPK3BL2E5RIL1 263 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 DNAJB6O75190 326 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 SLC22A5O76082 557 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 CD9P21926 228 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.71■□□□□ 0.59
SHANK1-203ENST00000391813 OR14K1Q8NGZ2 314 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 THAP4Q8WY91 577 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 SMARCD2Q92925 531 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 TMEM19Q96HH6 336 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 ATG5Q9H1Y0 275 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 TREX1Q9NSU2 369 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 WASHC1A8K0Z3 465 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 UBFD1O14562 309 aaKnown RBP18.71■□□□□ 0.59
SHANK1-203ENST00000391813 NUPL2O15504 423 aaKnown RBP18.71■□□□□ 0.59
SHANK1-203ENST00000391813 SPDEFO95238 335 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-203ENST00000391813 CLDN22Q8N7P3 220 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 KIAA1143Q96AT1 154 aaPredicted RBP18.71■□□□□ 0.59
SHANK1-203ENST00000391813 TMEM41AQ96HV5 264 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 SLC2A11Q9BYW1 496 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 EIF5A2Q9GZV4 153 aaKnown RBP18.71■□□□□ 0.59
SHANK1-203ENST00000391813 A0A1B0GVT2 93 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 SLC43A1O75387 559 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 GSG1LQ6UXU4 331 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 LSMEM2Q8N112 164 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 NAGSQ8N159 534 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 DPEP2Q9H4A9 486 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 THSD1Q9NS62 852 aa18.71■□□□□ 0.59
SHANK1-203ENST00000391813 A0A0D9SEW6 157 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 A0A1W2PPK0 400 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 OR6C74A6NCV1 312 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ADAMTS4O75173 837 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 S1PR1P21453 382 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 CD34P28906 385 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ETV1P50549 477 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ZNF550Q7Z398 422 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 OR5T2Q8NGG2 359 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 TMEM40Q8WWA1 233 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 MAL2Q969L2 176 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 SGIP1Q9BQI5 828 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ANHXE9PGG2 379 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 UGDHO60701 494 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 IFNA17P01571 189 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ADH7P40394 386 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 CPNE2Q96FN4 548 aaPredicted RBP18.7■□□□□ 0.58
SHANK1-203ENST00000391813 GRHPRQ9UBQ7 328 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 SLX4Q8IY92 1834 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 PRAMEF2O60811 474 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 CPNE6O95741 557 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 CA3P07451 260 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 SMN1Q16637 294 aaKnown RBP18.7■□□□□ 0.58
SHANK1-203ENST00000391813 KRBOX4Q5JUW0 171 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 FAM205BPQ63HN1 556 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 HCAR2Q8TDS4 363 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 NT5C3BQ969T7 300 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 KCTD12Q96CX2 325 aaKnown RBP18.7■□□□□ 0.58
SHANK1-203ENST00000391813 ARNT2Q9HBZ2 717 aa18.7■□□□□ 0.58
SHANK1-203ENST00000391813 FBXO8Q9NRD0 319 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 212.6 ms