RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 EXO5Q9H790 373 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 DDX31Q9H8H2 851 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 DMRT3Q9NQL9 472 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR6C2Q9NZP2 312 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC45A1Q9Y2W3 748 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 HYKKA2RU49 373 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 OR2AT4A6NND4 320 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 LEFTY2O00292 366 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 RAB3BP20337 219 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 RAB40BQ12829 278 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 CRHR2Q13324 411 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 CAMK1Q14012 370 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SCGB2B2Q4G0G5 96 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 TOR1AIP1Q5JTV8 583 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 UBE2Q1Q7Z7E8 422 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 PAQR7Q86WK9 346 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 TRAM1L1Q8N609 369 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 SUN3Q8TAQ9 357 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 KCNK6Q9Y257 313 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 LAMB2P55268 1798 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 KANTRA0A1W2PQU2 76 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 GLTPD2A6NH11 291 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ALDOBP05062 364 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 INHBBP09529 407 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF806P0C7X5 589 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ARAFP10398 606 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 MAT2AP31153 395 aaKnown RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 HOXD11P31277 338 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 MLLT3P42568 568 aaPredicted RBP12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAS2R43P59537 309 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 DUSP7Q16829 419 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 FCRLBQ6BAA4 426 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF627Q7L945 461 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 FAM124AQ86V42 546 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 PIGUQ9H490 435 aa12.45□□□□□ -0.42
TRAPPC9-201ENST00000389328 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF8P17098 575 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 PRKACAP17612 351 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ESCO2Q56NI9 601 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 PYHIN1Q6K0P9 492 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 UNC5DQ6UXZ4 953 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 L3MBTL4Q8NA19 623 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 KREMEN2Q8NCW0 462 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF563Q8TA94 476 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 FCAMRQ8WWV6 532 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 MYLIPQ8WY64 445 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF354BQ96LW1 612 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 LGR4Q9BXB1 951 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 GABARAPL1Q9H0R8 117 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 SAV1Q9H4B6 383 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TAS2R3Q9NYW6 316 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 CKLFQ9UBR5 152 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 FBXO10Q9UK96 956 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ELOA3DA6NLF2 546 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 H7C2Y5 167 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ADH1CP00326 375 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ARFIP1P53367 373 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 BTN1A1Q13410 526 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ELOA3BQ3SY89 546 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 HLA-DQA1Q5Y7H0 255 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 LRRN1Q6UXK5 716 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 OLIG3Q7RTU3 272 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMCO2Q7Z6W1 182 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 NUP43Q8NFH3 380 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ELOA3Q8NG57 546 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 HMGB4Q8WW32 186 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 OVCA2Q8WZ82 227 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 FATE1Q969F0 183 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ALG8Q9BVK2 526 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 COMMD4Q9H0A8 199 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 RC3H2Q9HBD1 1191 aaKnown RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ZNF226Q9NYT6 803 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 PCDHGB7Q9Y5F8 929 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ADAMTSL1Q8N6G6 1762 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3DA0A087WVF3 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3IA0A087WXS9 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3EA0A087X179 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3KA0A087X1G2 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3FA6NER0 549 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 POM121CA8CG34 1229 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3LB9A6J9 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ARPC5O15511 151 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3HP0C7X1 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 AHRP35869 848 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ADH7P40394 386 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 GALEQ14376 348 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 PLK5Q496M5 336 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3GQ6DHY5 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3CQ6IPX1 549 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 LRRTM4Q86VH4 590 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TBC1D3Q8IZP1 549 aaPredicted RBP12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 CLDN22Q8N7P3 220 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 SLC38A5Q8WUX1 472 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 RNF31Q96EP0 1072 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 ACTR6Q9GZN1 396 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 PLCXD1Q9NUJ7 323 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 GLTPQ9NZD2 209 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 TMPRSS11EQ9UL52 423 aa12.44□□□□□ -0.42
TRAPPC9-201ENST00000389328 B4DXG7 233 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms