RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 H3BN98 237 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 KIR2DS3K7RE56 304 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 M0R3H8 397 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 TLR4O00206 839 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 SNRNP200O75643 2136 aaKnown RBP11.85□□□□□ -0.51
VPS16-202ENST00000380445 ALPPP05187 535 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 NAT2P11245 290 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 CCR5P51681 352 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 XKP51811 444 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 NUDT6P53370 316 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 SNRPGP62308 76 aaKnown RBP11.85□□□□□ -0.51
VPS16-202ENST00000380445 FUT5Q11128 374 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 CCINQ13939 588 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 KIR2DS5Q14953 304 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 ZNF311Q5JNZ3 666 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 TMEM236Q5W0B7 351 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 PGBD2Q6P3X8 592 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 CD300LDQ6UXZ3 194 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 C16orf62Q7Z3J2 963 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 ABI3BPQ7Z7G0 1075 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 ZBTB46Q86UZ6 589 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 LACC1Q8IV20 430 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 SIX5Q8N196 739 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 ADAMTS15Q8TE58 950 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 FAM3CQ92520 227 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 C16orf58Q96GQ5 468 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 FUZQ9BT04 418 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 CACYBPQ9HB71 228 aaKnown RBP11.85□□□□□ -0.51
VPS16-202ENST00000380445 KLHL28Q9NXS3 571 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 GPR83Q9NYM4 423 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 NTMQ9P121 344 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 USP36Q9P275 1121 aaKnown RBP11.85□□□□□ -0.51
VPS16-202ENST00000380445 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.85□□□□□ -0.51
VPS16-202ENST00000380445 KLK4Q9Y5K2 254 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 TCEA1P23193 301 aaKnown RBP11.85□□□□□ -0.51
VPS16-202ENST00000380445 NR1D2Q14995 579 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 TIGD6Q17RP2 521 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 SLX4IPQ5VYV7 408 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 ZNF675Q8TD23 568 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 S100ZQ8WXG8 99 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 RSC1A1Q92681 617 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 LGALS12Q96DT0 336 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 VMP1Q96GC9 406 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 C10orf90Q96M02 699 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 CTRCQ99895 268 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 HMG20AQ9NP66 347 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 CPNE7Q9UBL6 633 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 DAPP1Q9UN19 280 aa11.85□□□□□ -0.51
VPS16-202ENST00000380445 KRBA1A5PL33 1030 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 CLDN25C9JDP6 229 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 FAM227AF5H4B4 570 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 CTSVO60911 334 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 STSP08842 583 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 PIPP12273 146 aaPredicted RBP11.84□□□□□ -0.51
VPS16-202ENST00000380445 GSTM3P21266 225 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 IFNGR2P38484 337 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 MAN2A2P49641 1150 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 MLLT10P55197 1068 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 VBP1P61758 197 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 LSM3P62310 102 aaKnown RBP11.84□□□□□ -0.51
VPS16-202ENST00000380445 TUBA1BP68363 451 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 ITGADQ13349 1161 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 SF3B4Q15427 424 aaKnown RBP eCLIP11.84□□□□□ -0.516e-6■■■■□ 20.8
VPS16-202ENST00000380445 TRIM16LQ309B1 348 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 DEFB134Q4QY38 66 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 FCRL6Q6DN72 434 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 TUBA1AQ71U36 451 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 B3GNT7Q8NFL0 401 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 OR13H1Q8NG92 308 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 OR6T1Q8NGN1 323 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 OTUB1Q96FW1 271 aaPredicted RBP11.84□□□□□ -0.51
VPS16-202ENST00000380445 MS4A4EQ96PG1 132 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 ZNF576Q9H609 170 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 KCMF1Q9P0J7 381 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 PILRAQ9UKJ1 303 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 B3GNT3Q9Y2A9 372 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 ANKRD34BA5PLL1 514 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 EFCAB9A8MZ26 197 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 C2CD4DB7Z1M9 353 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 J3QRK9 145 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 TPPPO94811 219 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 PTGER1P34995 402 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 NUDT1P36639 197 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 CLK1P49759 484 aaKnown RBP11.84□□□□□ -0.51
VPS16-202ENST00000380445 ZNF846Q147U1 533 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 LEXMQ3ZCV2 418 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 TMEM31Q5JXX7 168 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 KIAA0895LQ68EN5 471 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 PODNL1Q6PEZ8 512 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 ADCK1Q86TW2 530 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 OR8J1Q8NGP2 316 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 NDNFQ8TB73 568 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 ZCCHC10Q8TBK6 192 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 KAT2AQ92830 837 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 HPS1Q92902 700 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 SH3YL1Q96HL8 342 aaPredicted RBP11.84□□□□□ -0.51
VPS16-202ENST00000380445 CDCA4Q9BXL8 241 aa11.84□□□□□ -0.51
VPS16-202ENST00000380445 WDR12Q9GZL7 423 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms