RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 ACSM2AQ08AH3 577 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 WLSQ5T9L3 541 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ACSM2BQ68CK6 577 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 OR52E8Q6IFG1 317 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PACS2Q86VP3 889 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C10orf107Q8IVU9 208 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ULK2Q8IYT8 1036 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 LGI4Q8N135 537 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 METTL4Q8N3J2 472 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 OR2T11Q8NH01 316 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NUBPLQ8TB37 319 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF483Q8TF39 744 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF845Q96IR2 970 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF681Q96N22 645 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C1orf50Q9BV19 199 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 GSTO2Q9H4Y5 243 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 IL1RL2Q9HB29 575 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FOLH1BQ9HBA9 442 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SH2D2AQ9NP31 389 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SLC17A7Q9P2U7 560 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CNOT11Q9UKZ1 510 aaKnown RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 EXO1Q9UQ84 846 aaKnown RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 VDAC3Q9Y277 283 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NPIPA5A0A0B4J1W7 369 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FIGNL2A6NMB9 653 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C9JVG2 144 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NPIPA7E9PJI5 369 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 H3BML4 177 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FOXE1O00358 373 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SMNDC1O75940 238 aaKnown RBP eCLIP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 MLYCDO95822 493 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NPIPA8P0DM63 369 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CPOXP36551 454 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NCBP2P52298 156 aaKnown RBP eCLIP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ART1P52961 327 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C2orf80Q0P641 193 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FUT7Q11130 342 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NTRK2Q16620 822 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 RFTN2Q52LD8 501 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CDKL4Q5MAI5 379 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 APOOLQ6UXV4 268 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZAR1Q86SH2 424 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SLC44A2Q8IWA5 706 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 LRRC25Q8N386 305 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C9orf106Q8NAJ2 232 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 OR1J4Q8NGS1 313 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NEIL3Q8TAT5 605 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 MZB1Q8WU39 189 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 JADE3Q92613 823 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF775Q96BV0 537 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 REPS1Q96D71 796 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 TRIM44Q96DX7 344 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CHMP6Q96FZ7 201 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SH3YL1Q96HL8 342 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SERPINI1Q99574 410 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 G6PC3Q9BUM1 346 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 UGT2B28Q9BY64 529 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ROGDIQ9GZN7 287 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CLEC4MQ9H2X3 399 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 GSX1Q9H4S2 264 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C6orf203Q9P0P8 240 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SNX6Q9UNH7 406 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 OR10H1Q9Y4A9 318 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PCDHA9Q9Y5H5 950 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 KLF2Q9Y5W3 355 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF780BQ9Y6R6 833 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PHF3Q92576 2039 aaKnown RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FREM1Q5H8C1 2179 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 NSD1Q96L73 2696 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 GXYLT2A0PJZ3 443 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SEC22BO75396 215 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SKAP2O75563 359 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CRCPO75575 148 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PEPDP12955 493 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PTGDSP41222 190 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 IST1P53990 364 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CLDN20P56880 219 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 SIRPAP78324 504 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PHEXP78562 749 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PSG6Q00889 435 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PCDH1Q08174 1060 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CRYZQ08257 329 aaKnown RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FAM27E3Q08E93 113 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 GAB1Q13480 694 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 PTGR1Q14914 329 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 EXOC3L2Q2M3D2 409 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 FIGNL1Q6PIW4 674 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ARSKQ6UWY0 536 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ATG4DQ86TL0 474 aaPredicted RBP4.25□□□□□ -1.73
C9orf72-203ENST00000380003 MARCH3Q86UD3 253 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CDH24Q86UP0 819 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 IFT20Q8IY31 132 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ZNF441Q8N8Z8 693 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 CNEP1R1Q8N9A8 125 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 GOLM1Q8NBJ4 401 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 ATP6V1C2Q8NEY4 427 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 C16orf78Q8WTQ4 265 aa4.25□□□□□ -1.73
C9orf72-203ENST00000380003 DUSP19Q8WTR2 217 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms