RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 HNRNPH2P55795 449 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 PLGLB1Q02325 96 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 MRM1Q6IN84 353 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 FAM71E1Q6IPT2 247 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 HACD2Q6Y1H2 254 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 MEX3BQ6ZN04 569 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 ZNF793Q6ZN11 406 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 R3HCC1LQ7Z5L2 792 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 SULF2Q8IWU5 870 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 KRTCAP2Q8N6L1 136 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 PCYOX1LQ8NBM8 494 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 NFAM1Q8NET5 270 aaPredicted RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 CLHC1Q8NHS4 586 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 VKORC1Q9BQB6 163 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 BTBD10Q9BSF8 475 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 SORBS1Q9BX66 1292 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 TIMMDC1Q9NPL8 285 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 NDE1Q9NXR1 346 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 TAS2R1Q9NYW7 299 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 ATP6V1HQ9UI12 483 aa12.73□□□□□ -0.37
PRPF18-202ENST00000378572 LEF1Q9UJU2 399 aaPredicted RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 TEP1Q99973 2627 aaKnown RBP12.73□□□□□ -0.37
PRPF18-202ENST00000378572 A8MVJ9 347 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 FBP2O00757 339 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 TBX19O60806 448 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 GUCY1B2O75343 617 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 PDE9AO76083 593 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 CPOXP36551 454 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 MTTPP55157 894 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 RAB38P57729 211 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 PDE7AQ13946 482 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 FAM174BQ3ZCQ3 159 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 MMEL1Q495T6 779 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 DNAL1Q4LDG9 190 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 REP15Q6BDI9 236 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 RINLQ6ZS11 566 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 TMEM132CQ8N3T6 1108 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 DPP10Q8N608 796 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 RBM15BQ8NDT2 890 aaKnown RBP12.72□□□□□ -0.37
PRPF18-202ENST00000378572 OR8J2Q8NGG1 315 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 PHF10Q8WUB8 498 aaKnown RBP12.72□□□□□ -0.37
PRPF18-202ENST00000378572 ASB15Q8WXK1 588 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 TM4SF18Q96CE8 201 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 KLHL29Q96CT2 875 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 RCN3Q96D15 328 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 PRPF18Q99633 342 aaKnown RBP12.72□□□□□ -0.37
PRPF18-202ENST00000378572 REEP4Q9H6H4 257 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 HPF1Q9NWY4 346 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 LYARQ9NX58 379 aaKnown RBP12.72□□□□□ -0.37
PRPF18-202ENST00000378572 FBN2P35556 2912 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 OTOGQ6ZRI0 2925 aa12.72□□□□□ -0.37
PRPF18-202ENST00000378572 NCOA6Q14686 2063 aaPredicted RBP12.72□□□□□ -0.37
PRPF18-202ENST00000378572 CACNA1CQ13936 2221 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 MRASO14807 208 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 TMPRSS11DO60235 418 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
PRPF18-202ENST00000378572 NPPAP01160 153 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 PGRP06401 933 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 KRT16P08779 473 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 DDX5P17844 614 aaKnown RBP12.71□□□□□ -0.37
PRPF18-202ENST00000378572 CERS1P27544 350 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 KIR3DL1P43629 444 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 VPS26BQ4G0F5 336 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 SPANXN4Q5MJ08 99 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 ZNF227Q86WZ6 799 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 ACOT4Q8N9L9 421 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 APCDD1LQ8NCL9 501 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 FAM57AQ8TBR7 257 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 ROPN1LQ96C74 230 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 COQ8BQ96D53 544 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 SERINC2Q96SA4 455 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 LIN28AQ9H9Z2 209 aaKnown RBP12.71□□□□□ -0.37
PRPF18-202ENST00000378572 KCMF1Q9P0J7 381 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 CLCA3PQ9Y6N3 262 aa12.71□□□□□ -0.37
PRPF18-202ENST00000378572 MYOCOSA0A1B0GUC4 107 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 FAM166BA8MTA8 275 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 C9JVG2 144 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 ACOT7O00154 380 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 AIM2O14862 343 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 GYG2O15488 501 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 ZFAND5O76080 213 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 GBAP04062 536 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 IL3P08700 152 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 FAM58BPP0C7Q3 252 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 DRD2P14416 443 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 TNNI3P19429 210 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 S100A3P33764 101 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 NUDT2P50583 147 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 HNRNPFP52597 415 aaKnown RBP12.71□□□□□ -0.38
PRPF18-202ENST00000378572 HSD17B7P56937 341 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 MXRA7P84157 204 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 TLE4Q04727 773 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 C2orf80Q0P641 193 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 STX4Q12846 297 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 RUNX2Q13950 521 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 HEPACAMQ14CZ8 416 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 TIGD2Q4W5G0 525 aa12.71□□□□□ -0.38
PRPF18-202ENST00000378572 C16orf89Q6UX73 402 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms