RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 A0A087X0M5 115 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 A0A1B0GX30 115 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 SSTR2P30874 369 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 RAB13P51153 203 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 ARL16Q0P5N6 197 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 PPP1R26Q5T8A7 1209 aaPredicted RBP8.36□□□□□ -1.07
LIG3-202ENST00000378526 DCLRE1AQ6PJP8 1040 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 FAM151BQ6UXP7 276 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 OR6S1Q8NH40 331 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 NDNFQ8TB73 568 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.36□□□□□ -1.07
LIG3-202ENST00000378526 LMAN1LQ9HAT1 526 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 NOX3Q9HBY0 568 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 BTG4Q9NY30 223 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 VPS29Q9UBQ0 182 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 PCDHB3Q9Y5E6 796 aa8.36□□□□□ -1.07
LIG3-202ENST00000378526 ADGRL2O95490 1459 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 PDE4DIPQ5VU43 2346 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 OR6C68A6NDL8 312 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 HELTA6NFD8 242 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 G3V3Q6 166 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 AKR1A1P14550 325 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CSNK2A2P19784 350 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 C5AR1P21730 350 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 GIFP27352 417 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CLRN1P58418 232 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CDK6Q00534 326 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 KEAP1Q14145 624 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 LAPTM4AQ15012 233 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 GTDC1Q4AE62 458 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 TEX44Q53QW1 395 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 STEAP2Q8NFT2 490 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CNIH3Q8TBE1 160 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 APH1BQ8WW43 257 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SUSD6Q92537 303 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SNRNP25Q9BV90 132 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 GATA5Q9BWX5 397 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 KCTD3Q9Y597 815 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 DENND4BO75064 1496 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 CD300LBA8K4G0 201 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SLC31A2O15432 143 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 XYLBO75191 536 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 APEHP13798 732 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 CTRB1P17538 263 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 DDOSTP39656 456 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CCR8P51685 355 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SEZ6Q53EL9 994 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CTRB2Q6GPI1 263 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 STT3BQ8TCJ2 826 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SDSLQ96GA7 329 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 PIP5K1AQ99755 562 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SLCO5A1Q9H2Y9 848 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CPNE7Q9UBL6 633 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 RNF150Q9ULK6 438 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CDC14AQ9UNH5 594 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 HMGXB3Q12766 1538 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 TERTO14746 1132 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 ARPC1BO15143 372 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 MTNR1AP48039 350 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 DHPSP49366 369 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 MEOX2P50222 304 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 PER3P56645 1201 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SLC8B1Q6J4K2 584 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 LYSMD3Q7Z3D4 306 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SLC39A11Q8N1S5 342 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 C7orf57Q8NEG2 295 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 ABHD5Q8WTS1 349 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 DYRK2Q92630 601 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 NICN1Q9BSH3 213 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 AKTIPQ9H8T0 292 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 ZFC3H1O60293 1989 aaKnown RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 A6NDN8 102 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 H7BYZ3 331 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 ADAM11O75078 769 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 IGFBP1P08833 259 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 PTGER3P43115 390 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 FAM74A1Q5RGS3 127 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 C4orf19Q8IY42 314 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 OR51G2Q8NGK0 314 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 GSX2Q9BZM3 304 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SMIM30A4D0T7 59 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 MATN3O15232 486 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 LGI1O95970 557 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 FOLR1P15328 257 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 PTPRAP18433 802 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 ACOT6Q3I5F7 207 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 AADACL2Q6P093 401 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 ABHD12BQ7Z5M8 362 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 METTL17Q9H7H0 456 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 PXMP2Q9NR77 195 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.35□□□□□ -1.07
LIG3-202ENST00000378526 ASB3Q9Y575 518 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 SLCO1B1Q9Y6L6 691 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 A2MP01023 1474 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 GPR75-ASB3A0A0A6YYF3 556 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 PI15O43692 258 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 CTDNEP1O95476 244 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 RD3LP0DJH9 198 aa8.35□□□□□ -1.07
LIG3-202ENST00000378526 ZNF43P17038 809 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms