RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 UGT8Q16880 541 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ANXA8L1Q5VT79 327 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 OR4F3Q6IEY1 312 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 GRHL2Q6ISB3 625 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 FAHD1Q6P587 224 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 GALNT18Q6P9A2 607 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 CYP4Z1Q86W10 505 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 C10orf111Q8N326 155 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ESX1Q8N693 406 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ABHD11Q8NFV4 315 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 WDR20Q8TBZ3 569 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 C11orf24Q96F05 449 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 TCTN2Q96GX1 697 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 EPYCQ99645 322 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 EPS8L2Q9H6S3 715 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 PAK1IP1Q9NWT1 392 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 VNN3Q9NY84 501 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 VPS29Q9UBQ0 182 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 MEN1O00255 615 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 SERPINB7O75635 380 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ZNF682O95780 498 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 CATP04040 527 aaKnown RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 GSNP06396 782 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ALOX5P09917 674 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 FAM87AP0C7U9 286 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 DAPP51397 102 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 IRF8Q02556 426 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 TEKQ02763 1124 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 EMX1Q04741 257 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 E2F2Q14209 437 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ERV3-1Q14264 604 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 TBR1Q16650 682 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 FAM198BQ6UWH4 519 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 PRSS48Q7RTY5 328 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ZNF551Q7Z340 670 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 PTOV1Q86YD1 416 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 MCATQ8IVS2 390 aaKnown RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 METTL27Q8N6F8 245 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 AMER2Q8N7J2 671 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 VPS37AQ8NEZ2 397 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 FCGR1BQ92637 280 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 MR1Q95460 341 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 PYCR2Q96C36 320 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 YIPF6Q96EC8 236 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 SH3YL1Q96HL8 342 aaPredicted RBP11.63□□□□□ -0.55
VRK3-202ENST00000377011 MESP1Q9BRJ9 268 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 DPH7Q9BTV6 452 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 MROQ9BYG7 248 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 REEP1Q9H902 201 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ATAD3AQ9NVI7 634 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 SPATA7Q9P0W8 599 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 PADI1Q9ULC6 663 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 ABCG2Q9UNQ0 655 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 SLC22A14Q9Y267 594 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 GMPPBQ9Y5P6 360 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 RELNP78509 3460 aa11.63□□□□□ -0.55
VRK3-202ENST00000377011 PRRC2CQ9Y520 2896 aaKnown RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 MASP2O00187 686 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SCAMP2O15127 329 aaKnown RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 CPNE3O75131 537 aaKnown RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 OR2B3O76000 313 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 MSL3P1P0C860 447 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 COX7A2P14406 83 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 EFNA1P20827 205 aaPredicted RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 PRKACGP22612 351 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 PCGF2P35227 344 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 CLK3P49761 638 aaKnown RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 PSMD7P51665 324 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 NEK2P51955 445 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 FADDQ13158 208 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 AQP6Q13520 282 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 DNASE1L3Q13609 305 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SPCS2Q15005 226 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 DGUOKQ16854 277 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SPIN4Q56A73 249 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 ANKRD46Q86W74 232 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SYTL1Q8IYJ3 562 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 TTC29Q8NA56 475 aaPredicted RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 FBXO15Q8NCQ5 510 aaPredicted RBP11.62□□□□□ -0.55
VRK3-202ENST00000377011 OR7A2PQ8NGA2 310 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SGCDQ92629 289 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 CLIP3Q96DZ5 547 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 MACROD1Q9BQ69 325 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 DGCR6LQ9BY27 220 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 GABARAPL3Q9BY60 117 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 RIBC2Q9H4K1 309 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 AKIP1Q9NQ31 210 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SIRT5Q9NXA8 310 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 PADI2Q9Y2J8 665 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 PCDHGA10Q9Y5H3 936 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 SPTA1P02549 2419 aa11.62□□□□□ -0.55
VRK3-202ENST00000377011 OR2A25A4D2G3 310 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 A8MVJ9 347 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 E7EQ34 232 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 P2RX6O15547 441 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 RGS10O43665 173 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 PRAMEF4O60810 478 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 INMTO95050 263 aa11.61□□□□□ -0.55
VRK3-202ENST00000377011 TFPTP0C1Z6 253 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms