RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GPR83Q9NYM4 423 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 AQP9O43315 295 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 AIFM1O95831 613 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 DBIP07108 87 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 UGT2B7P16662 529 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 NDUFV2P19404 249 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 OTX2P32243 289 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 POLR2IP36954 125 aaKnown RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 TMEM196Q5HYL7 178 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 ADNP2Q6IQ32 1131 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 TRIM46Q7Z4K8 759 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 UBQLNLQ8IYU4 475 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 NLGN4XQ8N0W4 816 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 HORMAD2Q8N7B1 307 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 MS4A4EQ96PG1 132 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 CRB3Q9BUF7 120 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 MND1Q9BWT6 205 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 NMNAT1Q9HAN9 279 aaPredicted RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 ATXN7L1Q9ULK2 861 aaPredicted RBP16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 LRRC37AA6NMS7 1700 aa16.97■□□□□ 0.31
PTPDC1-202ENST00000375360 RIF1Q5UIP0 2472 aaKnown RBP16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 NUP62P37198 522 aaPredicted RBP16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 SOX2P48431 317 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 METRNLQ641Q3 311 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 GALNT15Q8N3T1 639 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 CYB561A3Q8NBI2 242 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF675Q8TD23 568 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 DIO2Q92813 273 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 TTYH2Q9BSA4 534 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 C14orf105Q9NVL8 296 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 TAS2R7Q9NYW3 318 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 SBK3P0C264 359 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 SCN1BQ07699 218 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 OLIG3Q7RTU3 272 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 CAPSLQ8WWF8 208 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 HPS1Q92902 700 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 C16orf58Q96GQ5 468 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 ZDHHC5Q9C0B5 715 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 TRIM36Q9NQ86 728 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 POT1Q9NUX5 634 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 ABCG2Q9UNQ0 655 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 TCRBV3S1A0A5B6 114 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 HYKKA2RU49 373 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 TACSTD2P09758 323 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 EIF2DP41214 584 aaKnown RBP16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 ZNF750Q32MQ0 723 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 PIK3R3Q92569 461 aa16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 ATOH1Q92858 354 aaPredicted RBP16.96■□□□□ 0.31
PTPDC1-202ENST00000375360 NRXN2Q9P2S2 1712 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC1A7O00341 560 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 GRPRP30550 384 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PCGF2P35227 344 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 MAP3K8P41279 467 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 GTF2IRD2BQ6EKJ0 949 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 C1orf94Q6P1W5 598 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 FAM111BQ6SJ93 734 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 FAM83HQ6ZRV2 1179 aaPredicted RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 GTF2IRD2Q86UP8 949 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 DCP2Q8IU60 420 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 ADOQ96SZ5 270 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 USP36Q9P275 1121 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 DLEC1Q9Y238 1755 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 H0YC42 278 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 HPRP00739 348 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PPP2CBP62714 309 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PPP2CAP67775 309 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 OR4K13Q8NH42 304 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 SLC37A2Q8TED4 501 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 METTL2AQ96IZ6 378 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 MAELQ96JY0 434 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 MRGPRX1Q96LB2 322 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 RBP7Q96R05 134 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 MGLLQ99685 303 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 MAP3K3Q99759 626 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PELOQ9BRX2 385 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 CACNA1EQ15878 2313 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 HLA-DPB1P04440 258 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PYCR1P32322 319 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 KIAA1211LQ6NV74 962 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 ZNF419Q96HQ0 510 aaPredicted RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PHF7Q9BWX1 381 aaPredicted RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 EPHX3Q9H6B9 360 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 DHCR7Q9UBM7 475 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 CASP8AP2Q9UKL3 1982 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 FOXE1O00358 373 aaPredicted RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 DENRO43583 198 aaKnown RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 TRIM3O75382 744 aaPredicted RBP16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 CSNK1G2P78368 415 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 GK3PQ14409 553 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 GGTA1PQ4G0N0 100 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 PLAC1Q9HBJ0 212 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 AGPAT4Q9NRZ5 378 aa16.95■□□□□ 0.3
PTPDC1-202ENST00000375360 UBE2QL1A1L167 161 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 UNC119BA6NIH7 251 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 IFNA6P05013 189 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 SYPP08247 313 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 RAB25P57735 213 aa16.94■□□□□ 0.3
PTPDC1-202ENST00000375360 HTRA4P83105 476 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms