RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CNR2P34972 360 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 CDH12P55289 794 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 SEC13P55735 322 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 CLDN8P56748 225 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 SNRPD1P62314 119 aaKnown RBP11.49□□□□□ -0.57
C9orf3-203ENST00000375315 HYAL1Q12794 435 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 VEZF1Q14119 521 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 CRTC2Q53ET0 693 aaPredicted RBP11.49□□□□□ -0.57
C9orf3-203ENST00000375315 SGO1Q5FBB7 561 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 ASB18Q6ZVZ8 466 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 USP45Q70EL2 814 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 ADIPOR2Q86V24 386 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 TMEM151BQ8IW70 566 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 YAF2Q8IY57 180 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 LINGO1Q96FE5 620 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 CXorf58Q96LI9 332 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 BOCQ9BWV1 1114 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 PLA2G2FQ9BZM2 168 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 ZFYVE1Q9HBF4 777 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 SLC25A19Q9HC21 320 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 SLAMF7Q9NQ25 335 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 MGAT4BQ9UQ53 548 aa11.49□□□□□ -0.57
C9orf3-203ENST00000375315 PQLC2LA1A4F0 135 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 NPIPB15A6NHN6 443 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 AIPO00170 330 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 CASC3O15234 703 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 ZNF821O75541 412 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 LEFTY1O75610 366 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 FGF2P09038 288 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SERPINA4P29622 427 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 MMP12P39900 470 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 BDKRB1P46663 353 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 AVPR1BP47901 424 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 EXOC3L2Q2M3D2 409 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 FNDC3BQ53EP0 1204 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SPIN4Q56A73 249 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 FAM198BQ6UWH4 519 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 STPG2Q8N412 459 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 CPXM2Q8N436 756 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 BVESQ8NE79 360 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 OR2T35Q8NGX2 323 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 USP7Q93009 1102 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SCAMP4Q969E2 229 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SFXN2Q96NB2 322 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 IL4I1Q96RQ9 567 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 WRAP53Q9BUR4 548 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SORBS1Q9BX66 1292 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 NLNQ9BYT8 704 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 ASB8Q9H765 288 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 RPL36Q9Y3U8 105 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 NUBP2Q9Y5Y2 271 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 LINC00587B1AMM8 73 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 GPR171O14626 319 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 GNB5O14775 395 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SLC19A2O60779 497 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 RNGTTO60942 597 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 POU2F1P14859 743 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 CPEP16870 476 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 RHCEP18577 417 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 GDI1P31150 447 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 PIK3CGP48736 1102 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 CAV3P56539 151 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 NTRK2Q16620 822 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 UGT8Q16880 541 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 PARM1Q6UWI2 310 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 HSD17B13Q7Z5P4 300 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 PTOV1Q86YD1 416 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SKA2Q8WVK7 121 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 FGF14Q92915 247 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 OTULINQ96BN8 352 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 DOHHQ9BU89 302 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 GPRC5BQ9NZH0 403 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 NDRG3Q9UGV2 375 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 MAFFQ9ULX9 164 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 MED16Q9Y2X0 877 aa11.48□□□□□ -0.57
C9orf3-203ENST00000375315 SPIN1Q9Y657 262 aaPredicted RBP11.48□□□□□ -0.57
C9orf3-203ENST00000375315 NUMA1Q14980 2115 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 LOC105369274A0A096LPK9 316 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ZAR1LA6NP61 321 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 CHRM5P08912 532 aaPredicted RBP11.47□□□□□ -0.57
C9orf3-203ENST00000375315 PEPDP12955 493 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 GPX2P18283 190 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 SMSP52788 366 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 EPHA4P54764 986 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 CTBP2P56545 445 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ST8SIA6P61647 398 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 TSPAN5P62079 268 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 PLK5Q496M5 336 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 PABPC1L2AQ5JQF8 200 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 PDSS1Q5T2R2 415 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 OR4N4Q8N0Y3 316 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 OR9Q2Q8NGE9 314 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 SMARCD2Q92925 531 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 RFT1Q96AA3 541 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 CHFRQ96EP1 664 aa11.47□□□□□ -0.57
C9orf3-203ENST00000375315 ASB16Q96NS5 453 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms