RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 TMEM102Q8N9M5 508 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 NLGN2Q8NFZ4 835 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 HOXB13Q92826 284 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 KLHL13Q9P2N7 655 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 HIF3AQ9Y2N7 669 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TPPPO94811 219 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CLIC3O95833 236 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CASP3P42574 277 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 BDKRB1P46663 353 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TAS2R46P59540 309 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 POU6F2P78424 691 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 MELKQ14680 651 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLC9B2Q86UD5 537 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CMTM1Q8IZ96 169 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF736B4DX44 427 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SEC14L5O43304 696 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 POLR2CP19387 275 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CAMLGP49069 296 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 C3orf33Q6P1S2 294 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 PIWIL3Q7Z3Z3 882 aaKnown RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CLEC14AQ86T13 490 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF461Q8TAF7 563 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TMEM163Q8TC26 289 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLC30A3Q99726 388 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLC19A3Q9BZV2 496 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ENY2Q9NPA8 101 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TBC1D3KA0A087X1G2 549 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 LRP5LA4QPB2 252 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TBC1D3FA6NER0 549 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 GPR37L1O60883 481 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ADRB3P13945 408 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 LMO2P25791 158 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 AAK1Q2M2I8 961 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TBC1D3GQ6DHY5 549 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 KCNIP4Q6PIL6 250 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 UBTD2Q8WUN7 234 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 RIPK3Q9Y572 518 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 PKD1L3Q7Z443 1732 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TLE2Q04725 743 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 GBX1Q14549 363 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SPCS2Q15005 226 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLC8B1Q6J4K2 584 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SSX6Q7RTT6 188 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ANKRD53Q8N9V6 530 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 GPR148Q8TDV2 347 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 PPP1R13LQ8WUF5 828 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 HTR3AP46098 478 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 SLC6A8P48029 635 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CEBPGP53567 150 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 CAP1Q01518 475 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 DUSP7Q16829 419 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 UQCC3Q6UW78 93 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 NDNFQ8TB73 568 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ACSS1Q9NUB1 689 aaPredicted RBP9.7□□□□□ -0.86
PTCH1-204ENST00000375290 GPR176Q14439 515 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 TMPRSS12Q86WS5 348 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 OR6T1Q8NGN1 323 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ACTRT3Q9BYD9 372 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 PPP4R1LQ9P1A2 415 aa9.7□□□□□ -0.86
PTCH1-204ENST00000375290 ZNF623O75123 536 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 HTR3BO95264 441 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 CD3GP09693 182 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 GALP22466 123 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PRKACGP22612 351 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 CHRNA4P43681 627 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 RD3Q7Z3Z2 195 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 OR5W2Q8NH69 310 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 STK35Q8TDR2 534 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 NPIPA7E9PJI5 369 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SDC3O75056 442 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 NPIPA8P0DM63 369 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 PIM3Q86V86 326 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 OR4K5Q8NGD3 323 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 DNMT3AQ9Y6K1 912 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 GPR137BO60478 399 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 GP1BBP13224 206 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TSFMP43897 325 aaKnown RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 BAMBIQ13145 260 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ILKQ13418 452 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 COL9A3Q14050 684 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SMARCD2Q92925 531 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 MS4A4EQ96PG1 132 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 OR14A2Q96R54 314 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 MYADMQ96S97 322 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 FAM83CQ9BQN1 747 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 POLDIP3Q9BY77 421 aaKnown RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SEPT4O43236 478 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 JUNDP17535 347 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 RAB31Q13636 194 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 OR5AK2Q8NH90 309 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 ALG8Q9BVK2 526 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 EPHA6Q9UF33 1036 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SLC7A11Q9UPY5 501 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SCN4AP35499 1836 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TRDV1A0A1B0GX56 115 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 MUSKO15146 869 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TO15178 435 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 TSPAN6O43657 245 aa9.69□□□□□ -0.86
PTCH1-204ENST00000375290 SRPX2O60687 465 aaPredicted RBP9.69□□□□□ -0.86
PTCH1-204ENST00000375290 CR2P20023 1033 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms