RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 PRAMEF4O60810 478 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 UGT2B11O75310 529 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 SH3BGRLO75368 114 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 PPM1BO75688 479 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 ZSCAN5DPP0CG00 497 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 ADH6P28332 368 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 TTKP33981 857 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 FDFT1P37268 417 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 BUD31P41223 144 aaPredicted RBP10.86□□□□□ -0.67
HDAC8-204ENST00000373560 TMED10P49755 219 aaKnown RBP10.86□□□□□ -0.67
HDAC8-204ENST00000373560 NEK2P51955 445 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 P2RY6Q15077 328 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 BCL2A1Q16548 175 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 PRAMEF9Q5VWM5 478 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 SLC30A6Q6NXT4 461 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 DEF8Q6ZN54 512 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 PIWIL2Q8TC59 973 aaKnown RBP10.86□□□□□ -0.67
HDAC8-204ENST00000373560 LINGO1Q96FE5 620 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 FOXN4Q96NZ1 517 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 KIFC1Q9BW19 673 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 OR10A4Q9H209 315 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 ESM1Q9NQ30 184 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 INTS10Q9NVR2 710 aaKnown RBP10.86□□□□□ -0.67
HDAC8-204ENST00000373560 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.86□□□□□ -0.67
HDAC8-204ENST00000373560 ZNF175Q9Y473 711 aa10.86□□□□□ -0.67
HDAC8-204ENST00000373560 A0A088AWK7 358 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 PRAMEF25A6NGN4 478 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 OR6C76A6NM76 312 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 CAPN14A8MX76 684 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ABCD4O14678 606 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 SMAD9O15198 467 aaKnown RBP10.85□□□□□ -0.67
HDAC8-204ENST00000373560 SS18L1O75177 396 aaPredicted RBP10.85□□□□□ -0.67
HDAC8-204ENST00000373560 TNFRSF21O75509 655 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 TJP3O95049 919 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 AIFM1O95831 613 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 CSF3P09919 207 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ZNF23P17027 643 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ZNF10P21506 573 aaPredicted RBP10.85□□□□□ -0.67
HDAC8-204ENST00000373560 CPN2P22792 545 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ATP5A1P25705 553 aaKnown RBP10.85□□□□□ -0.67
HDAC8-204ENST00000373560 SLC1A2P43004 574 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 EFNA4P52798 201 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 HADHBP55084 474 aaKnown RBP10.85□□□□□ -0.67
HDAC8-204ENST00000373560 HILS1P60008 231 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 FGFBP1Q14512 234 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 C11orf63Q6NUN7 778 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 PPP4R4Q6NUP7 873 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 NEPROQ6NW34 567 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 TMEM81Q6P7N7 255 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 PAQR3Q6TCH7 311 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 TMIGD1Q6UXZ0 262 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 SLCO4C1Q6ZQN7 724 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 PLCZ1Q86YW0 608 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ZNF615Q8N8J6 731 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ACOT4Q8N9L9 421 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 BPESC1Q9GZL8 116 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 FAIMQ9NVQ4 179 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 EMC9Q9Y3B6 208 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 ZNF337Q9Y3M9 751 aa10.85□□□□□ -0.67
HDAC8-204ENST00000373560 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 EFCAB8A8MWE9 144 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 EEDO75530 441 aaKnown RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 CLEC3AO75596 197 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 IFNB1P01574 187 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 PEPDP12955 493 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 GPX3P22352 226 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 ARFIP2P53365 341 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 RPP38P78345 283 aaKnown RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 HMGCS1Q01581 520 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 KLF1Q13351 362 aaPredicted RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 RCN2Q14257 317 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 CARTPTQ16568 116 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 MFSD12Q6NUT3 480 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 BEND4Q6ZU67 534 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 ST13P4Q8IZP2 240 aaPredicted RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 GABRG1Q8N1C3 465 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 MYO1HQ8N1T3 1032 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 STEAP2Q8NFT2 490 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 MRPL24Q96A35 216 aaKnown RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 OMA1Q96E52 524 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 RBM18Q96H35 190 aaKnown RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 RBM4Q9BWF3 364 aaKnown RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 IL22Q9GZX6 179 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 TRMT6Q9UJA5 497 aaKnown RBP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 SOX13Q9UN79 622 aa10.84□□□□□ -0.67
HDAC8-204ENST00000373560 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.84□□□□□ -0.67
HDAC8-204ENST00000373560 UQCRHLA0A096LP55 91 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 GLOD5A6NK44 160 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 H3BML4 177 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 TRIM77I1YAP6 450 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 SAP18O00422 153 aaKnown RBP10.83□□□□□ -0.68
HDAC8-204ENST00000373560 HAUS5O94927 633 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 CLDN9O95484 217 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 C1GALT1C1LP0DN25 315 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 GDF5P43026 501 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 PDLIM4P50479 330 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 CDKN2DP55273 166 aa10.83□□□□□ -0.68
HDAC8-204ENST00000373560 HNRNPH2P55795 449 aaKnown RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms