RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 MVB12BQ9H7P6 319 aa13.52□□□□□ -0.24
LMX1B-202ENST00000373474 SEC61A2Q9H9S3 476 aa13.52□□□□□ -0.24
LMX1B-202ENST00000373474 WDR6Q9NNW5 1121 aaKnown RBP13.52□□□□□ -0.24
LMX1B-202ENST00000373474 ACSL6Q9UKU0 697 aa13.52□□□□□ -0.24
LMX1B-202ENST00000373474 FEZF1A0PJY2 475 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 K7ERQ8 282 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 RNF13O43567 381 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 RPS17P08708 135 aaKnown RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 OR8U9P0C7N5 309 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 SPINT3P49223 89 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 HYAL2Q12891 473 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 LRIF1Q5T3J3 769 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 SPATC1Q76KD6 591 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 LRRC25Q8N386 305 aaPredicted RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 TMEM40Q8WWA1 233 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 TFAP2CQ92754 450 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 URM1Q9BTM9 101 aaKnown RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 PRMT8Q9NR22 394 aaPredicted RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 SPO11Q9Y5K1 396 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 NWD2Q9ULI1 1742 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 TEX51A0A1B0GUA7 166 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 H3BSH0 61 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 AHSA1O95433 338 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 EDN1P05305 212 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 CCL5P13501 91 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 POLR2CP19387 275 aaPredicted RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 CD6P30203 668 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 EVI2BP34910 448 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 ACTA2P62736 377 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 RPS26P62854 115 aaKnown RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 ACTG2P63267 376 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 METTL11BQ5VVY1 283 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 OR52E8Q6IFG1 317 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 ABHD11Q8NFV4 315 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 OR8K5Q8NH50 307 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 BRF2Q9HAW0 419 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 HEBP1Q9NRV9 189 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 BACE2Q9Y5Z0 518 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 ERCC1P07992 297 aaPredicted RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 HOXB2P14652 356 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 CHATP28329 748 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 OXTRP30559 389 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 CDNFQ49AH0 187 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 FAM122CQ6P4D5 195 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 CRTC1Q6UUV9 634 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 LARP4Q71RC2 724 aaKnown RBP eCLIP13.52□□□□□ -0.25
LMX1B-202ENST00000373474 ARHGAP12Q8IWW6 846 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 SLC5A8Q8N695 610 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 OR6N2Q8NGY6 317 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 KLRF1Q9NZS2 232 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 NUBP2Q9Y5Y2 271 aa13.52□□□□□ -0.25
LMX1B-202ENST00000373474 NAP1L6A6NFF2 107 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 UGDHO60701 494 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 UPK1BO75841 260 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 LAMP1P11279 417 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 S1PR1P21453 382 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 ACTBP60709 375 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 ACTG1P63261 375 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 PROX2Q3B8N5 592 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.51□□□□□ -0.25
LMX1B-202ENST00000373474 ELP2Q6IA86 826 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 KLBQ86Z14 1044 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 C7orf57Q8NEG2 295 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 OR56A3Q8NH54 315 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GABRQQ9UN88 632 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 UCHL1P09936 223 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GK3PQ14409 553 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 LRIT3Q3SXY7 679 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 ARHGAP40Q5TG30 622 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 METTL2BQ6P1Q9 378 aaKnown RBP13.51□□□□□ -0.25
LMX1B-202ENST00000373474 UNC5DQ6UXZ4 953 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 ADGRG5Q8IZF4 528 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 OR6C4Q8NGE1 309 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 OR51D1Q8NGF3 324 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 FAM83CQ9BQN1 747 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 RPS10P5Q9NQ39 176 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 SLC22A31A6NKX4 558 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 OSMP13725 252 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 NDUFV2P19404 249 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GCGRP47871 477 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 FGFBP1Q14512 234 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 OR8K3Q8NH51 312 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 OR2M4Q96R27 311 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 SLC2A11Q9BYW1 496 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 BTNL2Q9UIR0 455 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GXYLT2A0PJZ3 443 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GMDSO60547 372 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 CD3GP09693 182 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 CBLP22681 906 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 DCTP40126 519 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GPR143P51810 404 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 RPS15AP62244 130 aaKnown RBP13.51□□□□□ -0.25
LMX1B-202ENST00000373474 GPR157Q5UAW9 335 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 ECHDC3Q96DC8 303 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 PRODH2Q9UF12 536 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 PIM1P11309 404 aaPredicted RBP13.51□□□□□ -0.25
LMX1B-202ENST00000373474 AGXTP21549 392 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 DPP6P42658 865 aa13.51□□□□□ -0.25
LMX1B-202ENST00000373474 SNRPD2P62316 118 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms