RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 GP1BBP13224 206 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 BGNP21810 368 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 NTSP30990 170 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 CASP3P42574 277 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 CASP6P55212 293 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 KCNJ2P63252 427 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 NNATQ16517 81 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 ARHGAP11AQ6P4F7 1023 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 TMEM81Q6P7N7 255 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 NUP54Q7Z3B4 507 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 DOLPP1Q86YN1 238 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 FAM109AQ8N4B1 249 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 ZNF781Q8N8C0 355 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 DIO2Q92813 273 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 HGDQ93099 445 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 TINAGQ9UJW2 476 aa18.38■□□□□ 0.53
TMEM53-205ENST00000372244 NBPF19A0A087WUL8 3843 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 A0A1B0GVC2 190 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 LRRC3CA6NJW4 275 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 CCL21O00585 134 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 ZG16O60844 167 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 SKAP2O75563 359 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-205ENST00000372244 SNX4O95219 450 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 LRATO95237 230 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 RFPL3SP0C7P2 107 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 MAPK1P28482 360 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 MC3RP41968 323 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 MAGEA5P43359 124 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 RPL14P50914 215 aaKnown RBP18.37■□□□□ 0.53
TMEM53-205ENST00000372244 CORO7P57737 925 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 MAGOHP61326 146 aaKnown RBP18.37■□□□□ 0.53
TMEM53-205ENST00000372244 STX3Q13277 289 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 SLC10A1Q14973 349 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 ZNF385BQ569K4 471 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 BICRALQ6AI39 1079 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 ANKRD26P1Q6NSI1 321 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 CLHC1Q8NHS4 586 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 PPCDCQ96CD2 204 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 OMA1Q96E52 524 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 DOHHQ9BU89 302 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 FOLH1BQ9HBA9 442 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 ATP6V1HQ9UI12 483 aa18.37■□□□□ 0.53
TMEM53-205ENST00000372244 BOKQ9UMX3 212 aaPredicted RBP18.37■□□□□ 0.53
TMEM53-205ENST00000372244 ERN1O75460 977 aaKnown RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 CLDN1O95832 211 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 ABOP16442 354 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 PTGS2P35354 604 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 PSPHP78330 225 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 RPP38P78345 283 aaKnown RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 PSG6Q00889 435 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 SMU1Q2TAY7 513 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 FNDC7Q5VTL7 733 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 HHATQ5VTY9 493 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 IL23RQ5VWK5 629 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 PAOXQ6QHF9 649 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 TMEM107Q6UX40 140 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 NPSR1Q6W5P4 371 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 ZNF551Q7Z340 670 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 R3HCC1LQ7Z5L2 792 aaKnown RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 SLC34A3Q8N130 599 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 LIX1Q8N485 282 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 ANKRD42Q8N9B4 389 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 CIDECQ96AQ7 238 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 ACSS1Q9NUB1 689 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 SH3BP4Q9P0V3 963 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 NTMQ9P121 344 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 PLEKHB1Q9UF11 243 aaPredicted RBP18.36■□□□□ 0.53
TMEM53-205ENST00000372244 HRH3Q9Y5N1 445 aa18.36■□□□□ 0.53
TMEM53-205ENST00000372244 OR6C70A6NIJ9 312 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 ADAM10O14672 748 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 PDPK1O15530 556 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 SUSD5O60279 629 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 CDC40O60508 579 aaKnown RBP eCLIP18.35■□□□□ 0.53
TMEM53-205ENST00000372244 UGT2B11O75310 529 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 CELA3AP09093 270 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 PRPS2P11908 318 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 EMX2Q04743 252 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 PLCXD2Q0VAA5 305 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 BST1Q10588 318 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 DESI1Q6ICB0 168 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 MTFR2Q6P444 385 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 TRILQ7L0X0 811 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 KIRREL3Q8IZU9 778 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 FAM57AQ8TBR7 257 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 TMBIM1Q969X1 311 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 TUBGCP3Q96CW5 907 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 ZBED6CLQ96FA7 236 aaPredicted RBP18.35■□□□□ 0.53
TMEM53-205ENST00000372244 CCDC120Q96HB5 630 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 RILPQ96NA2 401 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 PHF12Q96QT6 1004 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 PAIP2Q9BPZ3 127 aaKnown RBP18.35■□□□□ 0.53
TMEM53-205ENST00000372244 ACKR4Q9NPB9 350 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 QPCTLQ9NXS2 382 aa18.35■□□□□ 0.53
TMEM53-205ENST00000372244 PRRG2O14669 202 aa18.34■□□□□ 0.53
TMEM53-205ENST00000372244 COQ9O75208 318 aa18.34■□□□□ 0.53
TMEM53-205ENST00000372244 SNTA1Q13424 505 aa18.34■□□□□ 0.53
TMEM53-205ENST00000372244 PTGR1Q14914 329 aa18.34■□□□□ 0.53
TMEM53-205ENST00000372244 TMEM198Q66K66 360 aa18.34■□□□□ 0.53
TMEM53-205ENST00000372244 PACS2Q86VP3 889 aa18.34■□□□□ 0.53
TMEM53-205ENST00000372244 RIMKLAQ8IXN7 391 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms