RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 OR5K1Q8NHB7 308 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 CDS1Q92903 461 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 CLIP3Q96DZ5 547 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 ZNF570Q96NI8 536 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 ZNF347Q96SE7 839 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 OCIAD1Q9NX40 245 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 SH3GLB1Q9Y371 365 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 SEC16AO15027 2179 aa24.53■■□□□ 1.52
ATPAF1-202ENST00000371937 A8MVJ9 347 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 KCNJ5P48544 419 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 KCNC4Q03721 635 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 ARHGAP11BQ3KRB8 267 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 NAXDQ8IW45 347 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 EDEM2Q9BV94 578 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 TMEM9BQ9NQ34 198 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 CACNA1HO95180 2353 aa24.52■■□□□ 1.52
ATPAF1-202ENST00000371937 SYNDIG1LA6NDD5 238 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 EFCAB7A8K855 629 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 FESP07332 822 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 FGF5P12034 268 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 TNNI3P19429 210 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 ARHGDIAP52565 204 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNF267Q14586 743 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 MLIPQ5VWP3 458 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 STK32CQ86UX6 486 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 TGIF2Q9GZN2 237 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 SLC38A1Q9H2H9 487 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 NDUFAF4Q9P032 175 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 SATB2Q9UPW6 733 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 ASCC3Q8N3C0 2202 aaKnown RBP24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 IGKV3D-11A0A0A0MRZ8 115 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 EI24O14681 340 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 DYRK3O43781 588 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 PRAMEF2O60811 474 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 TIAF1O95411 115 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 AK1P00568 194 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 MAP3K8P41279 467 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 OR1E2P47887 323 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNF155Q12901 538 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNHIT3Q15649 155 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 VWA2Q5GFL6 755 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 HIPK1Q86Z02 1210 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 HOXB13Q92826 284 aaPredicted RBP24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNF354BQ96LW1 612 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 HCN4Q9Y3Q4 1203 aa24.51■■□□□ 1.51
ATPAF1-202ENST00000371937 DSPPQ9NZW4 1301 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 C7orf72A4D263 438 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 IFNW1P05000 195 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 DCTP40126 519 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 IST1P53990 364 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 RHAGQ02094 409 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 FUT7Q11130 342 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 NKAIN1Q4KMZ8 207 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 OTUD3Q5T2D3 398 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 COX18Q8N8Q8 333 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 SLC38A9Q8NBW4 561 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 CHDHQ8NE62 594 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 ZNF300Q96RE9 604 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 CNPPD1Q9BV87 410 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 OSBPL11Q9BXB4 747 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 TRIM45Q9H8W5 580 aaPredicted RBP24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 REEP1Q9H902 201 aa24.5■■□□□ 1.51
ATPAF1-202ENST00000371937 POLR1CO15160 346 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 DIRAS1O95057 198 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 TNFRSF1BP20333 461 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 RORAP35398 523 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 PGDP52209 483 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 DCDP81605 110 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 CHRNEQ04844 493 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 RBM44Q6ZP01 1051 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 GPR32P1Q8NGA4 272 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 MAGEE2Q8TD90 523 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 GPR151Q8TDV0 419 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 MTHFD2LQ9H903 347 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 IFT80Q9P2H3 777 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 FAM32AQ9Y421 112 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 HEMK1Q9Y5R4 338 aaPredicted RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 U3KQV3 271 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 ADAMDEC1O15204 470 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 ALPPP05187 535 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 SSTR4P31391 388 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 DNAJA1P31689 397 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 EMDP50402 254 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 ALDH3A2P51648 485 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 PDX1P52945 283 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 OCA2Q04671 838 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 SPEM2Q0P670 501 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 DUSP8Q13202 625 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 MED21Q13503 144 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 CYP27C1Q4G0S4 372 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 SHQ1Q6PI26 577 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 TBPL2Q6SJ96 375 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 COX15Q7KZN9 410 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 OR7G1Q8NGA0 311 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 APOBEC4Q8WW27 367 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 NRBF2Q96F24 287 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 SDF2Q99470 211 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 LMF2Q9BU23 707 aaKnown RBP24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 APMAPQ9HDC9 416 aa24.49■■□□□ 1.51
ATPAF1-202ENST00000371937 SLC22A11Q9NSA0 550 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms