RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 TOR1AIP2Q8NFQ8 470 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 OR52J3Q8NH60 311 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 APOBEC4Q8WW27 367 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 GEMIN6Q8WXD5 167 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 FAM3CQ92520 227 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 TMEM19Q96HH6 336 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 FYTTD1Q96QD9 318 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 FAIM2Q9BWQ8 316 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 SRMSQ9H3Y6 488 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 C6orf106Q9H6K1 298 aaPredicted RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 C14orf119Q9NWQ9 140 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 USP36Q9P275 1121 aaKnown RBP12.07□□□□□ -0.48
GPC3-201ENST00000370818 MKLN1Q9UL63 735 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 TBC1D24Q9ULP9 559 aa12.07□□□□□ -0.48
GPC3-201ENST00000370818 PRAMEF27A3QJZ7 478 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 OR2A25A4D2G3 310 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 TRIM77I1YAP6 450 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 AIFM1O95831 613 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 LCKP06239 509 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 AKT2P31751 481 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 BMP8BP34820 402 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 PTGER1P34995 402 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 XCR1P46094 333 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 ARFIP1P53367 373 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 YPEL5P62699 121 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 DUSP2Q05923 314 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 PUM1Q14671 1186 aaKnown RBP eCLIP12.06□□□□□ -0.48
GPC3-201ENST00000370818 ZNF517Q6ZMY9 492 aaPredicted RBP12.06□□□□□ -0.48
GPC3-201ENST00000370818 Q6ZS52 159 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 TBC1D19Q8N5T2 526 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 OR13H1Q8NG92 308 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 SUN3Q8TAQ9 357 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 SLC38A4Q969I6 547 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 OMA1Q96E52 524 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 CNRIP1Q96F85 164 aaPredicted RBP12.06□□□□□ -0.48
GPC3-201ENST00000370818 FEVQ99581 238 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 ROGDIQ9GZN7 287 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 RANGRFQ9HD47 186 aaPredicted RBP12.06□□□□□ -0.48
GPC3-201ENST00000370818 RLIMQ9NVW2 624 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 GOLGA4Q13439 2230 aaKnown RBP12.06□□□□□ -0.48
GPC3-201ENST00000370818 A0A1W2PS29 197 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 AIREO43918 545 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 ZNF780AO75290 641 aaPredicted RBP12.06□□□□□ -0.48
GPC3-201ENST00000370818 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 LIPAP38571 399 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 NCBP2P52298 156 aaKnown RBP eCLIP12.06□□□□□ -0.484e-7■■■■□ 19.7
GPC3-201ENST00000370818 CDH12P55289 794 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 SPIBQ01892 262 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 MVKQ03426 396 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 NPRL3Q12980 569 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 TP53BP2Q13625 1128 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 SYT16Q17RD7 645 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 ZNF750Q32MQ0 723 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 ESCO2Q56NI9 601 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 C18orf63Q68DL7 685 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 DGLUCYQ7Z3D6 616 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 ZNF605Q86T29 641 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 RAB43Q86YS6 212 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 SLC44A2Q8IWA5 706 aaPredicted RBP12.06□□□□□ -0.48
GPC3-201ENST00000370818 AMER2Q8N7J2 671 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 FRMD1Q8N878 549 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 KCT2Q8NC54 265 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 MAT2BQ9NZL9 334 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 FBXW2Q9UKT8 454 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 CES1P1Q9UKY3 287 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 GMPPBQ9Y5P6 360 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 HS3ST3A1Q9Y663 406 aa12.06□□□□□ -0.48
GPC3-201ENST00000370818 MEIOCA2RUB1 952 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 RGS10O43665 173 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 CPNE3O75131 537 aaKnown RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 TRAPPC2P0DI81 140 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 TRAPPC2BP0DI82 140 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 IL7P13232 177 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 GLULP15104 373 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 CBLP22681 906 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 PTGS2P35354 604 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 SLC15A1P46059 708 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 LIMS1P48059 325 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 CXCR4P61073 352 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 POU6F2P78424 691 aaPredicted RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 PRRT3Q5FWE3 981 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 SLC5A8Q8N695 610 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 PATE1Q8WXA2 126 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 OR2A14Q96R47 310 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 PITX2Q99697 317 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 GABARAPL3Q9BY60 117 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 TTYH1Q9H313 450 aaPredicted RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 TCEAL2Q9H3H9 227 aaPredicted RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 DIABLOQ9NR28 239 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ACER3Q9NUN7 267 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 SCN3BQ9NY72 215 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 POLHQ9Y253 713 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 HSPE1-MOB4S4R3N1 261 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 TRIOO75962 3097 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 MYO10Q9HD67 2058 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 C5orf58C9J3I9 102 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ERAL1O75616 437 aaKnown RBP12.05□□□□□ -0.48
GPC3-201ENST00000370818 NAT2P11245 290 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ITGA2P17301 1181 aa12.05□□□□□ -0.48
GPC3-201ENST00000370818 ETV6P41212 452 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms