RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 ANKRD46Q86W74 232 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 ZNF227Q86WZ6 799 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 GOLM1Q8NBJ4 401 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 GLB1L3Q8NCI6 653 aaPredicted RBP13.69□□□□□ -0.22
COL9A1-204ENST00000370496 VPS37AQ8NEZ2 397 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 NUP43Q8NFH3 380 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 OR4A15Q8NGL6 344 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 OR5M3Q8NGP4 307 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 RFWD2Q8NHY2 731 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 FBXO30Q8TB52 745 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 HSPBAP1Q96EW2 488 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 SGCZQ96LD1 299 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 RILPQ96NA2 401 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 CCDC134Q9H6E4 229 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 FAM120CQ9NX05 1096 aaKnown RBP13.69□□□□□ -0.22
COL9A1-204ENST00000370496 ZIM2Q9NZV7 527 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 PCDHGB4Q9UN71 923 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 OR10H1Q9Y4A9 318 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 NPFFR2Q9Y5X5 522 aa13.69□□□□□ -0.22
COL9A1-204ENST00000370496 COPG1Q9Y678 874 aaKnown RBP13.69□□□□□ -0.22
COL9A1-204ENST00000370496 RNASET2O00584 256 aaKnown RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SLC22A3O75751 556 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 P04436 131 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 DRD5P21918 477 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 KRT20P35900 424 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 GPR85P60893 370 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 PMP22Q01453 160 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 TP53BP2Q13625 1128 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 VPS26BQ4G0F5 336 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 LYPD8Q6UX82 237 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 NPSR1Q6W5P4 371 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SLC44A2Q8IWA5 706 aaPredicted RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 CLECL1Q8IZS7 167 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SLC34A3Q8N130 599 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 BCORP1Q8N888 145 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 OR10G3Q8NGC4 313 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 OR56A1Q8NGH5 318 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SFXN5Q8TD22 340 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 JADE3Q92613 823 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SNRNP40Q96DI7 357 aaKnown RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 OMA1Q96E52 524 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 FAM120BQ96EK7 910 aaKnown RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 CHMP6Q96FZ7 201 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 TEX37Q96LM6 180 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 CXorf36Q9H7Y0 433 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 Q9N2J8 555 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SDR39U1Q9NRG7 319 aaPredicted RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 AGPAT4Q9NRZ5 378 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SIRT3Q9NTG7 399 aaPredicted RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 SACM1LQ9NTJ5 587 aa13.68□□□□□ -0.22
COL9A1-204ENST00000370496 GPR55Q9Y2T6 319 aaPredicted RBP13.68□□□□□ -0.22
COL9A1-204ENST00000370496 G3V3Y1 287 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 TP53I11O14683 189 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 PPM1BO75688 479 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 CRYABP02511 175 aaKnown RBP13.67□□□□□ -0.22
COL9A1-204ENST00000370496 PGRP06401 933 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 CT45A8P0DMV1 189 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 CT45A9P0DMV2 189 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 CCL3P10147 92 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 IL12BP29460 328 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 MEOX1P50221 254 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 DGKQP52824 942 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 FBXW4P57775 412 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 HBA1P69905 142 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 RPP38P78345 283 aaKnown RBP13.67□□□□□ -0.22
COL9A1-204ENST00000370496 NTRK2Q16620 822 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 ZNF791Q3KP31 576 aaPredicted RBP13.67□□□□□ -0.22
COL9A1-204ENST00000370496 CT45A2Q5DJT8 189 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 WDR53Q7Z5U6 358 aaPredicted RBP13.67□□□□□ -0.22
COL9A1-204ENST00000370496 OR9I1Q8NGQ6 314 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 OR5AK3PQ8NH89 298 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 GRHL3Q8TE85 626 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 STON2Q8WXE9 905 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 TMBIM1Q969X1 311 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 MOAP1Q96BY2 351 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 OR52E6Q96RD3 313 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 TMEM120AQ9BXJ8 343 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 OLAHQ9NV23 265 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 ASF1BQ9NVP2 202 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 TRIM33Q9UPN9 1127 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 NTNG1Q9Y2I2 539 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 ZNF462Q96JM2 2506 aa13.67□□□□□ -0.22
COL9A1-204ENST00000370496 RNF103-CHMP3A0A140T963 221 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PRSS51A0A1B0GVH4 220 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 KLRC4-KLRK1H3BQV0 150 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 TO15178 435 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PEX1O43933 1283 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 CPSF4O95639 269 aaKnown RBP13.66□□□□□ -0.22
COL9A1-204ENST00000370496 IL12AP29459 219 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 CCT3P49368 545 aaKnown RBP13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PRIM2P49643 509 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 WNT3P56703 355 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 SQLEQ14534 574 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 TIGD2Q4W5G0 525 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PRAMEF20Q5VT98 475 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 MFSD12Q6NUT3 480 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PAOXQ6QHF9 649 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 GK5Q6ZS86 529 aa13.66□□□□□ -0.22
COL9A1-204ENST00000370496 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms