RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 C19orf43Q9BQ61 176 aa6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 SPATA9Q9BWV2 254 aa6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 HDHD2Q9H0R4 259 aa6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 DHCR7Q9UBM7 475 aaKnown RBP6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 MALT1Q9UDY8 824 aa6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 MED31Q9Y3C7 131 aa6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 PCDHGA4Q9Y5G9 962 aa6.71□□□□□ -1.33
TGFBR3-202ENST00000370399 TDRD6O60522 2096 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TRBV4-1A0A0J9YWV2 114 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TSPAN11A1L157 253 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TFECO14948 347 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MFN2O95140 757 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 IFNGP01579 166 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MRPL3P09001 348 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MYF5P13349 255 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 BMP8BP34820 402 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TALDO1P37837 337 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 GUCA1AP43080 201 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 XCR1P46094 333 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 YPEL5P62699 121 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MRPS15P82914 257 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 BMP8AQ7Z5Y6 402 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 LUZP2Q86TE4 346 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SFTPA2Q8IWL1 248 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 OR51G2Q8NGK0 314 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 LINC00615Q96LM1 132 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 OR7D2Q96RA2 312 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 NIPSNAP1Q9BPW8 284 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 PHF7Q9BWX1 381 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ASIC5Q9NY37 505 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 NDUFAF4Q9P032 175 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ENTPD2Q9Y5L3 495 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TCRBV5S2A0A599 114 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MCIDASD6RGH6 385 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TBX1O43435 398 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 CHST10O43529 356 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 COQ9O75208 318 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 RPLP0P05388 317 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 GRK6P43250 576 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 GCGRP47871 477 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ZNF57Q68EA5 555 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SLC27A4Q6P1M0 643 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 NLRP8Q86W28 1048 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 COMMD2Q86X83 199 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SPARTQ8N0X7 666 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 VWA5B2Q8N398 1253 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 OR51L1Q8NGJ5 315 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ADAMTS16Q8TE57 1224 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SNX33Q8WV41 574 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SERINC2Q96SA4 455 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 NDEL1Q9GZM8 345 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MRTO4Q9UKD2 239 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ERVK-19Q9WJR5 959 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SIP14410 1827 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 CACNA1GO43497 2377 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 KCNE1BA0A087WTH5 132 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 LOC110117498-PIK3R3F6TDL0 507 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 HCRTR2O43614 444 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 PSMD7P51665 324 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 IL18R1Q13478 541 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 HTR4Q13639 388 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 DECR1Q16698 335 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 PIWIL3Q7Z3Z3 882 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 PTOV1Q86YD1 416 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 METTL25Q8N6Q8 603 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ZNF433Q8N7K0 673 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 POMGNT2Q8NAT1 580 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TP53I13Q8NBR0 393 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ZNF248Q8NDW4 579 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 C19orf18Q8NEA5 215 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ZNF675Q8TD23 568 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 SMPDL3BQ92485 455 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 RFKQ969G6 155 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 BORCS5Q969J3 196 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 COQ8BQ96D53 544 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 ITPAQ9BY32 194 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 AMBRA1Q9C0C7 1298 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 MKKSQ9NPJ1 570 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 TIMMDC1Q9NPL8 285 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 GALNT8Q9NY28 637 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 USP36Q9P275 1121 aaKnown RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 NFKBIL1Q9UBC1 381 aaPredicted RBP6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 CCL27Q9Y4X3 112 aa6.71□□□□□ -1.34
TGFBR3-202ENST00000370399 DAPL1A0PJW8 107 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 CLDN25C9JDP6 229 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 FAM47E-STBD1D6RA91 191 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 FAAHO00519 579 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 SCDO00767 359 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 YY2O15391 372 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 SCO2O43819 266 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 OR5F1O95221 314 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 SOD1P00441 154 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 GASTP01350 101 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 CCDC159P0C7I6 412 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 CRHBPP24387 322 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 BSGP35613 385 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 TAB1Q15750 504 aa6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 TRMT12Q53H54 448 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 RNASE12Q5GAN4 147 aaKnown RBP6.7□□□□□ -1.34
TGFBR3-202ENST00000370399 PRPF38BQ5VTL8 546 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms