RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 VWA5B2Q8N398 1253 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 FANK1Q8TC84 345 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 OR1E3Q8WZA6 343 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 DIRAS2Q96HU8 199 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 CITED4Q96RK1 184 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 PHF7Q9BWX1 381 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 A4GALTQ9NPC4 353 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TRIM36Q9NQ86 728 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 SERINC1Q9NRX5 453 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 TM7SF3Q9NS93 570 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF624Q9P2J8 865 aaPredicted RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GMPR2Q9P2T1 348 aaKnown RBP5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF225Q9UK10 706 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 GMEB2Q9UKD1 530 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 MKLN1Q9UL63 735 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ABCG2Q9UNQ0 655 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 USP22Q9UPT9 525 aa5.02□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF638Q14966 1978 aaKnown RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 KRBA1A5PL33 1030 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 UNC119BA6NIH7 251 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PLOD2O00469 737 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 POLR1CO15160 346 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 OR5F1O95221 314 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 GP1BBP13224 206 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 CPMP14384 443 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 C4BPBP20851 252 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 RORAP35398 523 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PHC1P78364 1004 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TIAL1Q01085 375 aaKnown RBP eCLIP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 SCN1BQ07699 218 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PCDH1Q08174 1060 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 MAD2L1BPQ15013 274 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF404Q494X3 552 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 RPS26P11Q5JNZ5 115 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF691Q5VV52 312 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM64Q6YI46 380 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM83HQ6ZRV2 1179 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 RABEPKQ7Z6M1 372 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 IGFN1Q86VF2 1251 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 COMMD2Q86X83 199 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ZNF619Q8N2I2 560 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 HORMAD2Q8N7B1 307 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 FGF14Q92915 247 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TCTN2Q96GX1 697 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 DMRTB1Q96MA1 342 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TRNT1Q96Q11 434 aaKnown RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TREX2Q9BQ50 279 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 RBCK1Q9BYM8 510 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 NAA50Q9GZZ1 169 aaKnown RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 MMP27Q9H306 513 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 SACM1LQ9NTJ5 587 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 HCN3Q9P1Z3 774 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC17A4Q9Y2C5 497 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PCDHGA8Q9Y5G5 932 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 CCDC182A6NF36 153 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 H0YGG7 62 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PROM1O43490 865 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 LAMTOR5O43504 91 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TLX3O43711 291 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PCDHGA12O60330 932 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 GREM1O60565 184 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 MOSPD3O75425 235 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 HBQ1P09105 142 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 NUDT7P0C024 238 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TNFRSF1BP20333 461 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 CD72P21854 359 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 AZGP1P25311 298 aaKnown RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 OPRL1P41146 370 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ALDH3B2P48448 385 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ARF3P61204 181 aaPredicted RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 VBP1P61758 197 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 HYAL1Q12794 435 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 SMAD4Q13485 552 aaKnown RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 GAS6Q14393 721 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 CDKN3Q16667 212 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM196Q5HYL7 178 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 CEP78Q5JTW2 689 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PHF19Q5T6S3 580 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PRAMEF8Q5VWM4 474 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PRAMEF7Q5VXH5 474 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TMEM236Q5W0B7 351 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ADNP2Q6IQ32 1131 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 FAM180BQ6P0A1 224 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 ZCCHC12Q6PEW1 402 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 RASGRP3Q8IV61 690 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 HS3ST5Q8IZT8 346 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 LMNTD1Q8N9Z9 388 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC38A5Q8WUX1 472 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TMCO6Q96DC7 493 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PEX11GQ96HA9 241 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 DDX31Q9H8H2 851 aaKnown RBP5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TBC1D17Q9HA65 648 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 THSD1Q9NS62 852 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 SLC25A37Q9NYZ2 338 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 CKLFQ9UBR5 152 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 PCDHGA4Q9Y5G9 962 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 TET1Q8NFU7 2136 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 LRIT2A6NDA9 550 aa5.01□□□□□ -1.61
SMNDC1-202ENST00000369603 GNB5O14775 395 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms