RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 CASP3P42574 277 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 TMED10P49755 219 aaKnown RBP18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 PDE7AQ13946 482 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 BICRALQ6AI39 1079 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 DESI1Q6ICB0 168 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 PAOXQ6QHF9 649 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 NPSR1Q6W5P4 371 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 MRGPRGQ86SM5 289 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 PRR22Q8IZ63 422 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 FAM9CQ8IZT9 166 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 OR5M3Q8NGP4 307 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 AMDHD1Q96NU7 426 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 UBQLN3Q9H347 655 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 GLIPR2Q9H4G4 154 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 ACKR4Q9NPB9 350 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 BOKQ9UMX3 212 aaPredicted RBP18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 TMED5Q9Y3A6 229 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 FIS1Q9Y3D6 152 aa18.83■□□□□ 0.6
SMNDC1-201ENST00000369592 AQP7O14520 342 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 PIP5K1BO14986 540 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 NME6O75414 186 aaPredicted RBP18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 CHEK2O96017 543 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 ENDOUP21128 410 aaKnown RBP18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 FRKP42685 505 aaPredicted RBP18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 KCNJ2P63252 427 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 SLC10A1Q14973 349 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 CDSNQ15517 529 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 NNATQ16517 81 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 SH2D4BQ5SQS7 431 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 CEP85LQ5SZL2 805 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 LRIG3Q6UXM1 1119 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 NCCRP1Q6ZVX7 275 aaPredicted RBP18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 NUP54Q7Z3B4 507 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 CD163Q86VB7 1156 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 MARVELD2Q8N4S9 558 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 DIO2Q92813 273 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 OMA1Q96E52 524 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 C3orf30Q96M34 536 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 BBS4Q96RK4 519 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 DOHHQ9BU89 302 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 PFDN4Q9NQP4 134 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 C19orf53Q9UNZ5 99 aaPredicted RBP18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 KLF2Q9Y5W3 355 aaPredicted RBP18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 PKDREJQ9NTG1 2253 aa18.82■□□□□ 0.6
SMNDC1-201ENST00000369592 NUP214P35658 2090 aaPredicted RBP18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 TM9SF1O15321 606 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 BIRC5O15392 142 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 HCN1O60741 890 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 SNX4O95219 450 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 JUNP05412 331 aaKnown RBP18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 BCKDHAP12694 445 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 DCTP40126 519 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 RIPPLY3P57055 190 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 CORO7P57737 925 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 ZNF385BQ569K4 471 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 XKRXQ6PP77 449 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 SLC34A3Q8N130 599 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 OR2L13Q8N349 312 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 CDC26Q8NHZ8 85 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 HOXB13Q92826 284 aaPredicted RBP18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 SLC35A4Q96G79 324 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 TMEM41AQ96HV5 264 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 PKNOX2Q96KN3 472 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 RILPQ96NA2 401 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 NODALQ96S42 347 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 FOLH1BQ9HBA9 442 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 MIEF1Q9NQG6 463 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 MED12Q93074 2177 aa18.81■□□□□ 0.6
SMNDC1-201ENST00000369592 ATP6AP2A0A1C7CYW4 349 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 OR6C70A6NIJ9 312 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 UPK1AO00322 258 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 ITM2AO43736 263 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 TSPAN2O60636 221 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 UGT2B11O75310 529 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 ATP6AP2O75787 350 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 TPOP07202 933 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 ESRRAP11474 423 aaPredicted RBP18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 NCBP2P52298 156 aaKnown RBP eCLIP18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 RPL38P63173 70 aaKnown RBP18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 PSG6Q00889 435 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 C3P1Q6ZMU1 363 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 CROCCP2Q86T23 111 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 NUDCD3Q8IVD9 361 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 ELP4Q96EB1 424 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 C20orf27Q9GZN8 174 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 REEP4Q9H6H4 257 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 NTMQ9P121 344 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 BAIAP2L1Q9UHR4 511 aa18.8■□□□□ 0.6
SMNDC1-201ENST00000369592 C2CD3Q4AC94 2353 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 ERN1O75460 977 aaKnown RBP18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 SERPINE1P05121 402 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 MAP3K8P41279 467 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 MC3RP41968 323 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 PSPHP78330 225 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 PLCXD2Q0VAA5 305 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 SNTA1Q13424 505 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 GXYLT1Q4G148 440 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 C6orf136Q5SQH8 315 aa18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 BEND6Q5SZJ8 279 aaPredicted RBP18.79■□□□□ 0.6
SMNDC1-201ENST00000369592 DDIASQ8IXT1 998 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms